Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 AGAP12P-201ENST00000585227 2359 ntBASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 AL023775.1-201ENST00000454907 1746 ntBASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 AL031719.1-201ENST00000623365 2587 ntBASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 KRT18P64-201ENST00000434946 1219 ntBASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 SAMD11P1-201ENST00000571429 661 ntBASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 AC116407.3-201ENST00000623905 1129 ntBASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 AC011840.2-201ENST00000563063 1520 ntBASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 AC135782.3-201ENST00000562782 2105 ntBASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 AC009947.1-201ENST00000444350 727 ntBASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 AL121894.2-201ENST00000602977 491 ntBASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ERCC6LQ2NKX8 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 MYADML-201ENST00000474610 2147 ntBASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 PCDHA6-201ENST00000378126 3267 ntBASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.77■□□□□ 0.11
ERCC6LQ2NKX8 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC6LQ2NKX8 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC6LQ2NKX8 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC6LQ2NKX8 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC15.76■□□□□ 0.11
ERCC6LQ2NKX8 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.76■□□□□ 0.11
ERCC6LQ2NKX8 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC6LQ2NKX8 HLA-A-201ENST00000376802 1334 ntBASIC15.76■□□□□ 0.11
ERCC6LQ2NKX8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.76■□□□□ 0.11
ERCC6LQ2NKX8 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
ERCC6LQ2NKX8 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
ERCC6LQ2NKX8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.76■□□□□ 0.11
ERCC6LQ2NKX8 FO393414.2-201ENST00000405153 598 ntBASIC15.76■□□□□ 0.11
ERCC6LQ2NKX8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.76■□□□□ 0.11
ERCC6LQ2NKX8 AC079776.4-201ENST00000511039 504 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms