Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 LINC01115-203ENST00000606068 577 ntBASIC12.29□□□□□ -0.44
SRPXP78539 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.29□□□□□ -0.44
SRPXP78539 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.29□□□□□ -0.44
SRPXP78539 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.29□□□□□ -0.44
SRPXP78539 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 IL9RP2-201ENST00000423948 1312 ntBASIC12.29□□□□□ -0.44
SRPXP78539 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.29□□□□□ -0.44
SRPXP78539 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 AC023794.5-201ENST00000564380 2157 ntBASIC12.29□□□□□ -0.44
SRPXP78539 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.29□□□□□ -0.44
SRPXP78539 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.29□□□□□ -0.44
SRPXP78539 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
SRPXP78539 AC107918.4-201ENST00000641966 3141 ntBASIC12.28□□□□□ -0.44
SRPXP78539 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SRPXP78539 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.28□□□□□ -0.44
SRPXP78539 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 CLK3P2-201ENST00000427566 1453 ntBASIC12.28□□□□□ -0.44
SRPXP78539 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 AC105206.1-202ENST00000314927 2368 ntBASIC12.28□□□□□ -0.44
SRPXP78539 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.28□□□□□ -0.44
SRPXP78539 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SRPXP78539 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SRPXP78539 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SRPXP78539 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SRPXP78539 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.28□□□□□ -0.44
SRPXP78539 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SRPXP78539 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
SRPXP78539 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 SPDYE7P-202ENST00000420373 878 ntBASIC12.28□□□□□ -0.44
SRPXP78539 HLA-K-203ENST00000430151 1046 ntBASIC12.28□□□□□ -0.44
SRPXP78539 RBPMS2P1-201ENST00000437762 623 ntBASIC12.28□□□□□ -0.44
SRPXP78539 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.28□□□□□ -0.44
SRPXP78539 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
SRPXP78539 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.28□□□□□ -0.44
SRPXP78539 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.28□□□□□ -0.44
SRPXP78539 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.28□□□□□ -0.44
SRPXP78539 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.28□□□□□ -0.44
SRPXP78539 AC022145.2-201ENST00000598203 171 ntBASIC12.28□□□□□ -0.44
SRPXP78539 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.28□□□□□ -0.44
SRPXP78539 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.28□□□□□ -0.44
SRPXP78539 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.28□□□□□ -0.44
SRPXP78539 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
SRPXP78539 KRT8P35-201ENST00000483942 1338 ntBASIC12.28□□□□□ -0.44
SRPXP78539 AC093525.8-201ENST00000624099 1342 ntBASIC12.28□□□□□ -0.44
SRPXP78539 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.28□□□□□ -0.44
SRPXP78539 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.28□□□□□ -0.44
SRPXP78539 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SRPXP78539 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.28□□□□□ -0.44
SRPXP78539 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SRPXP78539 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.28□□□□□ -0.44
SRPXP78539 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.28□□□□□ -0.44
SRPXP78539 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRPXP78539 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRPXP78539 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SRPXP78539 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SRPXP78539 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.27□□□□□ -0.44
SRPXP78539 AC015909.5-201ENST00000624336 2266 ntBASIC12.27□□□□□ -0.44
SRPXP78539 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRPXP78539 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRPXP78539 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.27□□□□□ -0.44
SRPXP78539 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.27□□□□□ -0.44
SRPXP78539 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SRPXP78539 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRPXP78539 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRPXP78539 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRPXP78539 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.27□□□□□ -0.44
SRPXP78539 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SRPXP78539 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRPXP78539 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms