Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSR1P43307 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSR1P43307 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSR1P43307 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.92■□□□□ 0.14
SSR1P43307 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.92■□□□□ 0.14
SSR1P43307 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.92■□□□□ 0.14
SSR1P43307 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSR1P43307 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSR1P43307 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSR1P43307 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SSR1P43307 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.92■□□□□ 0.14
SSR1P43307 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.91■□□□□ 0.14
SSR1P43307 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.91■□□□□ 0.14
SSR1P43307 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SSR1P43307 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 INTS4P2-202ENST00000614726 2019 ntBASIC15.91■□□□□ 0.14
SSR1P43307 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.91■□□□□ 0.14
SSR1P43307 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SSR1P43307 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.91■□□□□ 0.14
SSR1P43307 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.91■□□□□ 0.14
SSR1P43307 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.91■□□□□ 0.14
SSR1P43307 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.91■□□□□ 0.14
SSR1P43307 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.91■□□□□ 0.14
SSR1P43307 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.91■□□□□ 0.14
SSR1P43307 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.91■□□□□ 0.14
SSR1P43307 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.91■□□□□ 0.14
SSR1P43307 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 AC093813.1-201ENST00000605066 256 ntBASIC15.91■□□□□ 0.14
SSR1P43307 AC004233.3-201ENST00000607794 1269 ntBASIC15.91■□□□□ 0.14
SSR1P43307 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.91■□□□□ 0.14
SSR1P43307 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.91■□□□□ 0.14
SSR1P43307 AC093525.8-201ENST00000624099 1342 ntBASIC15.91■□□□□ 0.14
SSR1P43307 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.91■□□□□ 0.14
SSR1P43307 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSR1P43307 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SSR1P43307 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SSR1P43307 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.9■□□□□ 0.14
SSR1P43307 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.9■□□□□ 0.14
SSR1P43307 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SSR1P43307 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SSR1P43307 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.9■□□□□ 0.14
SSR1P43307 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SSR1P43307 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 C1QBPP1-201ENST00000400117 770 ntBASIC15.9■□□□□ 0.14
SSR1P43307 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.9■□□□□ 0.14
SSR1P43307 HLA-K-203ENST00000430151 1046 ntBASIC15.9■□□□□ 0.14
SSR1P43307 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.9■□□□□ 0.14
SSR1P43307 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.9■□□□□ 0.14
SSR1P43307 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.9■□□□□ 0.14
SSR1P43307 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.9■□□□□ 0.14
SSR1P43307 AC120045.2-201ENST00000567334 178 ntBASIC15.9■□□□□ 0.14
SSR1P43307 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.9■□□□□ 0.14
SSR1P43307 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.9■□□□□ 0.14
SSR1P43307 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.9■□□□□ 0.14
SSR1P43307 AC009118.2-201ENST00000613275 655 ntBASIC15.9■□□□□ 0.14
SSR1P43307 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.9■□□□□ 0.14
SSR1P43307 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.9■□□□□ 0.14
SSR1P43307 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms