Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH1P12830 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH1P12830 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH1P12830 AC092135.3-201ENST00000624151 1846 ntBASIC14.54□□□□□ -0.08
CDH1P12830 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDH1P12830 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDH1P12830 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CDH1P12830 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 AC018442.1-201ENST00000421439 2061 ntBASIC14.54□□□□□ -0.08
CDH1P12830 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH1P12830 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CDH1P12830 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CDH1P12830 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDH1P12830 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CDH1P12830 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDH1P12830 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CDH1P12830 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDH1P12830 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH1P12830 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
CDH1P12830 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH1P12830 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH1P12830 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDH1P12830 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH1P12830 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
CDH1P12830 AC005229.1-201ENST00000392885 409 ntBASIC14.53□□□□□ -0.08
CDH1P12830 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH1P12830 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH1P12830 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH1P12830 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH1P12830 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CDH1P12830 AC233724.13-201ENST00000598383 410 ntBASIC14.53□□□□□ -0.08
CDH1P12830 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDH1P12830 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDH1P12830 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH1P12830 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH1P12830 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDH1P12830 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDH1P12830 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDH1P12830 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH1P12830 AP001267.2-201ENST00000532619 2086 ntBASIC14.53□□□□□ -0.08
CDH1P12830 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH1P12830 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.52□□□□□ -0.08
CDH1P12830 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDH1P12830 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH1P12830 AL138709.1-201ENST00000614840 1693 ntBASIC14.52□□□□□ -0.08
CDH1P12830 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.52□□□□□ -0.08
CDH1P12830 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.52□□□□□ -0.08
CDH1P12830 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH1P12830 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH1P12830 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH1P12830 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH1P12830 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH1P12830 AC018665.1-201ENST00000622927 1362 ntBASIC14.52□□□□□ -0.08
CDH1P12830 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDH1P12830 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH1P12830 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH1P12830 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH1P12830 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CDH1P12830 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDH1P12830 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH1P12830 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CDH1P12830 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH1P12830 FO681548.1-201ENST00000455617 1132 ntBASIC14.52□□□□□ -0.09
CDH1P12830 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.52□□□□□ -0.09
CDH1P12830 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms