Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.1□□□□□ -0.31
UBCP0CG48 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.1□□□□□ -0.31
UBCP0CG48 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.1□□□□□ -0.31
UBCP0CG48 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
UBCP0CG48 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.1□□□□□ -0.31
UBCP0CG48 AL139094.1-201ENST00000405549 1188 ntBASIC13.1□□□□□ -0.31
UBCP0CG48 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.1□□□□□ -0.31
UBCP0CG48 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
UBCP0CG48 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 AL589987.1-201ENST00000453380 819 ntBASIC13.1□□□□□ -0.31
UBCP0CG48 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.1□□□□□ -0.31
UBCP0CG48 RRP7BP-205ENST00000566851 833 ntBASIC13.1□□□□□ -0.31
UBCP0CG48 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.1□□□□□ -0.31
UBCP0CG48 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.1□□□□□ -0.31
UBCP0CG48 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.1□□□□□ -0.31
UBCP0CG48 AC007431.3-201ENST00000623221 587 ntBASIC13.1□□□□□ -0.31
UBCP0CG48 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.1□□□□□ -0.31
UBCP0CG48 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
UBCP0CG48 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.1□□□□□ -0.31
UBCP0CG48 KRT8P22-201ENST00000562317 1415 ntBASIC13.1□□□□□ -0.31
UBCP0CG48 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
UBCP0CG48 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 AC022144.1-201ENST00000602255 1580 ntBASIC13.1□□□□□ -0.31
UBCP0CG48 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.1□□□□□ -0.31
UBCP0CG48 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
UBCP0CG48 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.1□□□□□ -0.31
UBCP0CG48 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
UBCP0CG48 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBCP0CG48 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.09□□□□□ -0.31
UBCP0CG48 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.09□□□□□ -0.31
UBCP0CG48 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.09□□□□□ -0.31
UBCP0CG48 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.09□□□□□ -0.31
UBCP0CG48 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UBCP0CG48 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UBCP0CG48 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
UBCP0CG48 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
UBCP0CG48 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
UBCP0CG48 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.09□□□□□ -0.31
UBCP0CG48 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
UBCP0CG48 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.09□□□□□ -0.31
UBCP0CG48 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.09□□□□□ -0.31
UBCP0CG48 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.09□□□□□ -0.31
UBCP0CG48 MEP1AP4-201ENST00000423244 1087 ntBASIC13.09□□□□□ -0.31
UBCP0CG48 RN7SL399P-201ENST00000471648 279 ntBASIC13.09□□□□□ -0.31
UBCP0CG48 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
UBCP0CG48 AC022616.1-201ENST00000518688 554 ntBASIC13.09□□□□□ -0.31
UBCP0CG48 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.09□□□□□ -0.31
UBCP0CG48 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.09□□□□□ -0.31
UBCP0CG48 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.09□□□□□ -0.31
UBCP0CG48 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.09□□□□□ -0.31
UBCP0CG48 DUX4L47-201ENST00000566374 394 ntBASIC13.09□□□□□ -0.31
UBCP0CG48 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.09□□□□□ -0.31
UBCP0CG48 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.09□□□□□ -0.31
UBCP0CG48 AL691403.2-201ENST00000618460 490 ntBASIC13.09□□□□□ -0.31
UBCP0CG48 AL390754.1-201ENST00000619088 582 ntBASIC13.09□□□□□ -0.31
UBCP0CG48 AC099521.3-201ENST00000624251 2938 ntBASIC13.09□□□□□ -0.31
UBCP0CG48 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
UBCP0CG48 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
UBCP0CG48 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UBCP0CG48 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.09□□□□□ -0.31
UBCP0CG48 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UBCP0CG48 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBCP0CG48 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.09□□□□□ -0.31
UBCP0CG48 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms