Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.92□□□□□ -0.02
SMAD6O43541 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.92□□□□□ -0.02
SMAD6O43541 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SMAD6O43541 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.92□□□□□ -0.02
SMAD6O43541 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.92□□□□□ -0.02
SMAD6O43541 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SMAD6O43541 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SMAD6O43541 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SMAD6O43541 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SMAD6O43541 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SMAD6O43541 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SMAD6O43541 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.92□□□□□ -0.02
SMAD6O43541 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.92□□□□□ -0.02
SMAD6O43541 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.92□□□□□ -0.02
SMAD6O43541 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.92□□□□□ -0.02
SMAD6O43541 AC012441.2-201ENST00000444843 739 ntBASIC14.92□□□□□ -0.02
SMAD6O43541 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.92□□□□□ -0.02
SMAD6O43541 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.92□□□□□ -0.02
SMAD6O43541 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.92□□□□□ -0.02
SMAD6O43541 SCARNA21-201ENST00000517026 139 ntBASIC14.92□□□□□ -0.02
SMAD6O43541 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.92□□□□□ -0.02
SMAD6O43541 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.92□□□□□ -0.02
SMAD6O43541 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.92□□□□□ -0.02
SMAD6O43541 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
SMAD6O43541 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.92□□□□□ -0.02
SMAD6O43541 ACTG1P17-201ENST00000558391 1119 ntBASIC14.92□□□□□ -0.02
SMAD6O43541 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 AC008805.1-201ENST00000590892 364 ntBASIC14.92□□□□□ -0.02
SMAD6O43541 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.92□□□□□ -0.02
SMAD6O43541 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.92□□□□□ -0.02
SMAD6O43541 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.92□□□□□ -0.02
SMAD6O43541 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SMAD6O43541 AC138028.6-201ENST00000616106 1482 ntBASIC14.92□□□□□ -0.02
SMAD6O43541 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.92□□□□□ -0.02
SMAD6O43541 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.92□□□□□ -0.02
SMAD6O43541 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SMAD6O43541 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.92□□□□□ -0.02
SMAD6O43541 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.92□□□□□ -0.02
SMAD6O43541 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 TMBIM7P-202ENST00000641474 1516 ntBASIC14.92□□□□□ -0.02
SMAD6O43541 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMAD6O43541 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.91□□□□□ -0.02
SMAD6O43541 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SMAD6O43541 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 KHSRPP1-201ENST00000427983 1768 ntBASIC14.91□□□□□ -0.02
SMAD6O43541 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SMAD6O43541 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.91□□□□□ -0.02
SMAD6O43541 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SMAD6O43541 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SMAD6O43541 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SMAD6O43541 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 EIF4HP1-201ENST00000453115 687 ntBASIC14.91□□□□□ -0.02
SMAD6O43541 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.91□□□□□ -0.02
SMAD6O43541 HLA-J-204ENST00000495278 958 ntBASIC14.91□□□□□ -0.02
SMAD6O43541 SCARNA20.5-201ENST00000516991 142 ntBASIC14.91□□□□□ -0.02
SMAD6O43541 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.91□□□□□ -0.02
SMAD6O43541 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.91□□□□□ -0.02
SMAD6O43541 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.91□□□□□ -0.02
SMAD6O43541 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.91□□□□□ -0.02
SMAD6O43541 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.91□□□□□ -0.02
SMAD6O43541 AC090164.2-201ENST00000611487 516 ntBASIC14.91□□□□□ -0.02
SMAD6O43541 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 AL139099.5-201ENST00000635274 300 ntBASIC14.91□□□□□ -0.02
SMAD6O43541 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMAD6O43541 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SMAD6O43541 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SMAD6O43541 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms