Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 MIR600HG-201ENST00000449175 5984 ntBASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRG3Q9Y2Y8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 AC078875.1-201ENST00000431907 724 ntBASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 AL035414.1-201ENST00000451327 857 ntBASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 IGLV3-15-201ENST00000518356 244 ntBASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 PRKXP1-201ENST00000561423 1122 ntBASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 LINC01101-201ENST00000622953 1884 ntBASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 AC144522.1-201ENST00000625111 1658 ntBASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRG3Q9Y2Y8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 AL136172.1-201ENST00000598590 1394 ntBASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 AC234782.1-201ENST00000451950 919 ntBASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.8■□□□□ 0.12
PRG3Q9Y2Y8 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms