Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 REXO1L1P-201ENST00000379010 6598 ntBASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 AL022323.5-201ENST00000624101 2059 ntBASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 AP000845.1-201ENST00000581677 2131 ntBASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
UBQLN2Q9UHD9 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 AC022447.6-201ENST00000515522 438 ntBASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 AL513190.1-201ENST00000621254 727 ntBASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 AC004877.2-201ENST00000623941 599 ntBASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 AC111170.3-201ENST00000624282 2464 ntBASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBQLN2Q9UHD9 AC129492.6-201ENST00000611383 1305 ntBASIC12.62□□□□□ -0.39
UBQLN2Q9UHD9 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBQLN2Q9UHD9 AC090505.1-201ENST00000430515 1834 ntBASIC12.62□□□□□ -0.39
UBQLN2Q9UHD9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBQLN2Q9UHD9 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms