Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 AL592076.1-201ENST00000424448 303 ntBASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 RPSAP15-201ENST00000448168 861 ntBASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 AP002803.1-201ENST00000528836 498 ntBASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 SIGLEC18P-201ENST00000602271 909 ntBASIC15.27■□□□□ 0.04
HCFC1R1Q9NWW0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 CICP6-201ENST00000457191 2729 ntBASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
HCFC1R1Q9NWW0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 KRT18P9-201ENST00000604826 1300 ntBASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 MIR557-201ENST00000385239 98 ntBASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 AL807761.2-201ENST00000422849 729 ntBASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 PGAM1P5-201ENST00000548011 764 ntBASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 AC005632.3-201ENST00000605544 308 ntBASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1R1Q9NWW0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms