Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 KHSRPP1-201ENST00000427983 1768 ntBASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM38AQ9H6F2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 CICP16-201ENST00000502609 2813 ntBASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 MESTP3-201ENST00000503460 968 ntBASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 ALG3P1-201ENST00000508806 1114 ntBASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM38AQ9H6F2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 AL162726.2-201ENST00000438986 1017 ntBASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM38AQ9H6F2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms