Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 AC079178.1-201ENST00000420915 656 ntBASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 FAM86HP-204ENST00000513466 959 ntBASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP3Q9BWW4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP3Q9BWW4 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP3Q9BWW4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.46□□□□□ -0.42
SSBP3Q9BWW4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP3Q9BWW4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.46□□□□□ -0.42
SSBP3Q9BWW4 AC015818.8-201ENST00000587907 1519 ntBASIC12.46□□□□□ -0.42
SSBP3Q9BWW4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP3Q9BWW4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.46□□□□□ -0.42
SSBP3Q9BWW4 KRT8P4-201ENST00000509735 1454 ntBASIC12.46□□□□□ -0.42
SSBP3Q9BWW4 AL109954.1-202ENST00000564051 2148 ntBASIC12.46□□□□□ -0.42
SSBP3Q9BWW4 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.46□□□□□ -0.42
SSBP3Q9BWW4 AC104581.4-201ENST00000623126 3052 ntBASIC12.46□□□□□ -0.42
SSBP3Q9BWW4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP3Q9BWW4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 MIR326-201ENST00000362220 95 ntBASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 AL136309.1-201ENST00000403917 691 ntBASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 AC073413.1-201ENST00000603927 732 ntBASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 REXO1L2P-201ENST00000425429 2069 ntBASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms