Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 AC236430.1-201ENST00000402231 743 ntBASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 AC093433.1-201ENST00000458048 571 ntBASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 AC022447.6-201ENST00000515522 438 ntBASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 HSPA7-201ENST00000445535 1927 ntBASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 SALL4P5-201ENST00000419001 1760 ntBASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LSMEM1Q8N8F7 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 MYO15B-237ENST00000642007 4893 ntBASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 TP53TG3HP-202ENST00000569755 579 ntBASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 AL033527.5-201ENST00000641382 801 ntBASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LSMEM1Q8N8F7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms