Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATPAF1Q5TC12 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13□□□□□ -0.33
ATPAF1Q5TC12 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 CICP8-201ENST00000455800 2813 ntBASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 FAM86LP-201ENST00000478302 853 ntBASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 AC093726.1-201ENST00000608064 963 ntBASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ATPAF1Q5TC12 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 RPL13AP25-201ENST00000484130 612 ntBASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 AC104596.2-201ENST00000512793 793 ntBASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 API5-211ENST00000534695 560 ntTSL 5 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 AL132655.2-201ENST00000596276 594 ntBASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms