Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.59■□□□□ 0.09
IRX4P78413 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.59■□□□□ 0.09
IRX4P78413 AC005912.2-201ENST00000619492 2400 ntBASIC15.59■□□□□ 0.09
IRX4P78413 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
IRX4P78413 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IRX4P78413 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.59■□□□□ 0.09
IRX4P78413 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.59■□□□□ 0.09
IRX4P78413 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
IRX4P78413 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
IRX4P78413 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IRX4P78413 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
IRX4P78413 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
IRX4P78413 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
IRX4P78413 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IRX4P78413 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.59■□□□□ 0.09
IRX4P78413 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
IRX4P78413 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IRX4P78413 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
IRX4P78413 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
IRX4P78413 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
IRX4P78413 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
IRX4P78413 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.58■□□□□ 0.09
IRX4P78413 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.58■□□□□ 0.09
IRX4P78413 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
IRX4P78413 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.58■□□□□ 0.09
IRX4P78413 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.58■□□□□ 0.09
IRX4P78413 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.58■□□□□ 0.09
IRX4P78413 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
IRX4P78413 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
IRX4P78413 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
IRX4P78413 AL607033.1-201ENST00000623900 1599 ntBASIC15.58■□□□□ 0.09
IRX4P78413 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.58■□□□□ 0.08
IRX4P78413 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.58■□□□□ 0.08
IRX4P78413 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
IRX4P78413 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.58■□□□□ 0.08
IRX4P78413 MIR326-201ENST00000362220 95 ntBASIC15.58■□□□□ 0.08
IRX4P78413 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.58■□□□□ 0.08
IRX4P78413 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 SLC25A24P2-201ENST00000415059 510 ntBASIC15.58■□□□□ 0.08
IRX4P78413 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.58■□□□□ 0.08
IRX4P78413 KRT18P64-201ENST00000434946 1219 ntBASIC15.58■□□□□ 0.08
IRX4P78413 EEF1DP4-201ENST00000446006 880 ntBASIC15.58■□□□□ 0.08
IRX4P78413 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.58■□□□□ 0.08
IRX4P78413 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.58■□□□□ 0.08
IRX4P78413 VDAC1P7-201ENST00000462417 847 ntBASIC15.58■□□□□ 0.08
IRX4P78413 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.58■□□□□ 0.08
IRX4P78413 RNA5SP423-201ENST00000517127 109 ntBASIC15.58■□□□□ 0.08
IRX4P78413 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
IRX4P78413 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.58■□□□□ 0.08
IRX4P78413 HNRNPUP1-201ENST00000554987 333 ntBASIC15.58■□□□□ 0.08
IRX4P78413 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.58■□□□□ 0.08
IRX4P78413 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.58■□□□□ 0.08
IRX4P78413 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.58■□□□□ 0.08
IRX4P78413 AC097359.3-201ENST00000603982 1210 ntBASIC15.58■□□□□ 0.08
IRX4P78413 AL022328.3-201ENST00000607943 679 ntBASIC15.58■□□□□ 0.08
IRX4P78413 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.58■□□□□ 0.08
IRX4P78413 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.58■□□□□ 0.08
IRX4P78413 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
IRX4P78413 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
IRX4P78413 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.58■□□□□ 0.08
IRX4P78413 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.58■□□□□ 0.08
IRX4P78413 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.58■□□□□ 0.08
IRX4P78413 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IRX4P78413 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
IRX4P78413 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.57■□□□□ 0.08
IRX4P78413 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
IRX4P78413 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
IRX4P78413 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
IRX4P78413 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.57■□□□□ 0.08
IRX4P78413 ZBED1P1-201ENST00000502364 1930 ntBASIC15.57■□□□□ 0.08
IRX4P78413 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.57■□□□□ 0.08
IRX4P78413 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.57■□□□□ 0.08
IRX4P78413 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms