Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AC132938.4-201ENST00000623835 848 ntBASIC13.91□□□□□ -0.18
PSMD4P55036 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.91□□□□□ -0.18
PSMD4P55036 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.91□□□□□ -0.18
PSMD4P55036 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
PSMD4P55036 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.91□□□□□ -0.18
PSMD4P55036 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.91□□□□□ -0.18
PSMD4P55036 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.91□□□□□ -0.18
PSMD4P55036 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.91□□□□□ -0.18
PSMD4P55036 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.91□□□□□ -0.18
PSMD4P55036 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
PSMD4P55036 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.91□□□□□ -0.18
PSMD4P55036 DMBT1P1-203ENST00000636837 4628 ntBASIC13.91□□□□□ -0.18
PSMD4P55036 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 AL731571.1-201ENST00000617058 5428 ntBASIC13.9□□□□□ -0.18
PSMD4P55036 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 AC023090.2-201ENST00000625182 2110 ntBASIC13.9□□□□□ -0.18
PSMD4P55036 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PSMD4P55036 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.9□□□□□ -0.18
PSMD4P55036 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PSMD4P55036 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PSMD4P55036 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.9□□□□□ -0.18
PSMD4P55036 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.9□□□□□ -0.18
PSMD4P55036 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.9□□□□□ -0.18
PSMD4P55036 AC007969.1-201ENST00000433675 447 ntBASIC13.9□□□□□ -0.18
PSMD4P55036 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.9□□□□□ -0.18
PSMD4P55036 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.9□□□□□ -0.18
PSMD4P55036 AC026434.2-201ENST00000506094 1078 ntBASIC13.9□□□□□ -0.18
PSMD4P55036 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
PSMD4P55036 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.9□□□□□ -0.18
PSMD4P55036 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.9□□□□□ -0.18
PSMD4P55036 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.9□□□□□ -0.18
PSMD4P55036 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 BTNL10-201ENST00000595971 695 ntBASIC13.9□□□□□ -0.18
PSMD4P55036 AC012645.4-201ENST00000610691 1061 ntBASIC13.9□□□□□ -0.18
PSMD4P55036 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.9□□□□□ -0.18
PSMD4P55036 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.9□□□□□ -0.18
PSMD4P55036 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.9□□□□□ -0.18
PSMD4P55036 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.9□□□□□ -0.18
PSMD4P55036 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.9□□□□□ -0.18
PSMD4P55036 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PSMD4P55036 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 AL137784.3-201ENST00000623858 2288 ntBASIC13.9□□□□□ -0.18
PSMD4P55036 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PSMD4P55036 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
PSMD4P55036 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PSMD4P55036 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PSMD4P55036 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.9□□□□□ -0.18
PSMD4P55036 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PSMD4P55036 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PSMD4P55036 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PSMD4P55036 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PSMD4P55036 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
PSMD4P55036 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PSMD4P55036 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.89□□□□□ -0.19
PSMD4P55036 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PSMD4P55036 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.89□□□□□ -0.19
PSMD4P55036 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PSMD4P55036 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.89□□□□□ -0.19
PSMD4P55036 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.89□□□□□ -0.19
PSMD4P55036 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.89□□□□□ -0.19
PSMD4P55036 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms