Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TUBP50607 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
TUBP50607 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBP50607 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TUBP50607 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBP50607 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TUBP50607 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 PCDHA3-202ENST00000532566 4594 ntBASIC15.7■□□□□ 0.1
TUBP50607 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TUBP50607 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 MIR326-201ENST00000362220 95 ntBASIC15.7■□□□□ 0.1
TUBP50607 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.7■□□□□ 0.1
TUBP50607 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.7■□□□□ 0.1
TUBP50607 RPSAP36-202ENST00000494591 1261 ntBASIC15.7■□□□□ 0.1
TUBP50607 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBP50607 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBP50607 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.7■□□□□ 0.1
TUBP50607 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.7■□□□□ 0.1
TUBP50607 AC091271.1-201ENST00000611877 1162 ntBASIC15.7■□□□□ 0.1
TUBP50607 AC244157.2-201ENST00000616239 1006 ntBASIC15.7■□□□□ 0.1
TUBP50607 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBP50607 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TUBP50607 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBP50607 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
TUBP50607 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBP50607 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.69■□□□□ 0.1
TUBP50607 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TUBP50607 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBP50607 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBP50607 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.69■□□□□ 0.1
TUBP50607 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.69■□□□□ 0.1
TUBP50607 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.69■□□□□ 0.1
TUBP50607 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TUBP50607 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 AL591846.1-201ENST00000451736 433 ntBASIC15.69■□□□□ 0.1
TUBP50607 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.69■□□□□ 0.1
TUBP50607 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.69■□□□□ 0.1
TUBP50607 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBP50607 AC138696.2-201ENST00000607376 223 ntBASIC15.69■□□□□ 0.1
TUBP50607 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
TUBP50607 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBP50607 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TUBP50607 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TUBP50607 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TUBP50607 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBP50607 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TUBP50607 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TUBP50607 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBP50607 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms