Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL391069.4-201ENST00000609583 481 ntBASIC14.38□□□□□ -0.11
CAPN3P20807 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.38□□□□□ -0.11
CAPN3P20807 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN3P20807 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN3P20807 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 CICP16-201ENST00000502609 2813 ntBASIC14.38□□□□□ -0.11
CAPN3P20807 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 KRT8P22-201ENST00000562317 1415 ntBASIC14.38□□□□□ -0.11
CAPN3P20807 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.38□□□□□ -0.11
CAPN3P20807 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN3P20807 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.38□□□□□ -0.11
CAPN3P20807 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CAPN3P20807 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 AC087499.5-201ENST00000452760 1342 ntBASIC14.38□□□□□ -0.11
CAPN3P20807 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CAPN3P20807 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN3P20807 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN3P20807 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CAPN3P20807 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.37□□□□□ -0.11
CAPN3P20807 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN3P20807 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN3P20807 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN3P20807 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.37□□□□□ -0.11
CAPN3P20807 MIR658-201ENST00000385210 100 ntBASIC14.37□□□□□ -0.11
CAPN3P20807 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.37□□□□□ -0.11
CAPN3P20807 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
CAPN3P20807 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN3P20807 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.37□□□□□ -0.11
CAPN3P20807 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.37□□□□□ -0.11
CAPN3P20807 AC009477.1-201ENST00000452936 217 ntBASIC14.37□□□□□ -0.11
CAPN3P20807 INE1-201ENST00000456273 945 ntBASIC14.37□□□□□ -0.11
CAPN3P20807 AC092658.1-201ENST00000505836 891 ntBASIC14.37□□□□□ -0.11
CAPN3P20807 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.37□□□□□ -0.11
CAPN3P20807 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.37□□□□□ -0.11
CAPN3P20807 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN3P20807 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.37□□□□□ -0.11
CAPN3P20807 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CAPN3P20807 AC092337.1-201ENST00000568699 1129 ntBASIC14.37□□□□□ -0.11
CAPN3P20807 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.37□□□□□ -0.11
CAPN3P20807 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.37□□□□□ -0.11
CAPN3P20807 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
CAPN3P20807 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CAPN3P20807 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.37□□□□□ -0.11
CAPN3P20807 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN3P20807 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN3P20807 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CAPN3P20807 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.36□□□□□ -0.11
CAPN3P20807 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CAPN3P20807 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
CAPN3P20807 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CAPN3P20807 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.36□□□□□ -0.11
CAPN3P20807 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms