Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
MT-ND1P03886 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.11□□□□□ -0.15
MT-ND1P03886 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 AL596442.2-201ENST00000610240 980 ntBASIC14.11□□□□□ -0.15
MT-ND1P03886 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.11□□□□□ -0.15
MT-ND1P03886 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.11□□□□□ -0.15
MT-ND1P03886 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.11□□□□□ -0.15
MT-ND1P03886 AL137783.1-201ENST00000623494 1896 ntBASIC14.11□□□□□ -0.15
MT-ND1P03886 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MT-ND1P03886 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.11□□□□□ -0.15
MT-ND1P03886 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MT-ND1P03886 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MT-ND1P03886 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.11□□□□□ -0.15
MT-ND1P03886 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.11□□□□□ -0.15
MT-ND1P03886 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.11□□□□□ -0.15
MT-ND1P03886 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.11□□□□□ -0.15
MT-ND1P03886 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.11□□□□□ -0.15
MT-ND1P03886 AC090505.1-201ENST00000430515 1834 ntBASIC14.11□□□□□ -0.15
MT-ND1P03886 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.1□□□□□ -0.15
MT-ND1P03886 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
MT-ND1P03886 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 AL356585.2-201ENST00000625078 2396 ntBASIC14.1□□□□□ -0.15
MT-ND1P03886 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
MT-ND1P03886 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.1□□□□□ -0.15
MT-ND1P03886 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
MT-ND1P03886 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
MT-ND1P03886 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.1□□□□□ -0.15
MT-ND1P03886 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.1□□□□□ -0.15
MT-ND1P03886 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.1□□□□□ -0.15
MT-ND1P03886 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.1□□□□□ -0.15
MT-ND1P03886 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 CNN2P2-201ENST00000443536 909 ntBASIC14.1□□□□□ -0.15
MT-ND1P03886 CNN2P3-201ENST00000450201 906 ntBASIC14.1□□□□□ -0.15
MT-ND1P03886 AC109322.1-201ENST00000524499 1264 ntBASIC14.1□□□□□ -0.15
MT-ND1P03886 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.1□□□□□ -0.15
MT-ND1P03886 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.1□□□□□ -0.15
MT-ND1P03886 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 TEX28P1-201ENST00000613479 1221 ntBASIC14.1□□□□□ -0.15
MT-ND1P03886 TEX28P2-201ENST00000617764 1221 ntBASIC14.1□□□□□ -0.15
MT-ND1P03886 SPDYE12P-201ENST00000618416 771 ntBASIC14.1□□□□□ -0.15
MT-ND1P03886 AL136317.3-201ENST00000618497 906 ntBASIC14.1□□□□□ -0.15
MT-ND1P03886 AL359183.1-201ENST00000623796 2132 ntBASIC14.1□□□□□ -0.15
MT-ND1P03886 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.1□□□□□ -0.15
MT-ND1P03886 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
MT-ND1P03886 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 MEX3B-202ENST00000558133 4333 ntBASIC14.1□□□□□ -0.15
MT-ND1P03886 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.1□□□□□ -0.15
MT-ND1P03886 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
MT-ND1P03886 INE2-201ENST00000630399 1874 ntBASIC14.1□□□□□ -0.15
MT-ND1P03886 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms