Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC10.24□□□□□ -0.77
NDUFA1O15239 AL079307.3-201ENST00000556114 283 ntBASIC10.24□□□□□ -0.77
NDUFA1O15239 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
NDUFA1O15239 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.24□□□□□ -0.77
NDUFA1O15239 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC10.24□□□□□ -0.77
NDUFA1O15239 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC10.24□□□□□ -0.77
NDUFA1O15239 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
NDUFA1O15239 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 MX1-218ENST00000619682 1980 ntTSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
NDUFA1O15239 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC10.24□□□□□ -0.77
NDUFA1O15239 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
NDUFA1O15239 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.23□□□□□ -0.77
NDUFA1O15239 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
NDUFA1O15239 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC10.23□□□□□ -0.77
NDUFA1O15239 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
NDUFA1O15239 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC10.23□□□□□ -0.77
NDUFA1O15239 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC10.23□□□□□ -0.77
NDUFA1O15239 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.23□□□□□ -0.77
NDUFA1O15239 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC10.23□□□□□ -0.77
NDUFA1O15239 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 HIST3H2BA-201ENST00000436555 524 ntBASIC10.23□□□□□ -0.77
NDUFA1O15239 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 SPDYE14P-201ENST00000442619 822 ntBASIC10.23□□□□□ -0.77
NDUFA1O15239 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
NDUFA1O15239 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC10.23□□□□□ -0.77
NDUFA1O15239 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC10.23□□□□□ -0.77
NDUFA1O15239 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.23□□□□□ -0.77
NDUFA1O15239 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC10.23□□□□□ -0.77
NDUFA1O15239 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.23□□□□□ -0.77
NDUFA1O15239 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC10.23□□□□□ -0.77
NDUFA1O15239 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.23□□□□□ -0.77
NDUFA1O15239 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC10.23□□□□□ -0.77
NDUFA1O15239 MIR4453-201ENST00000584019 89 ntBASIC10.23□□□□□ -0.77
NDUFA1O15239 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.23□□□□□ -0.77
NDUFA1O15239 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.23□□□□□ -0.77
NDUFA1O15239 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC10.23□□□□□ -0.77
NDUFA1O15239 AL133215.2-201ENST00000609242 977 ntBASIC10.23□□□□□ -0.77
NDUFA1O15239 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC10.23□□□□□ -0.77
NDUFA1O15239 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NDUFA1O15239 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms