Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 AC007326.2-201ENST00000624224 7579 ntBASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 ANKRD19P-201ENST00000338192 862 ntBASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 CLUHP6-201ENST00000580789 941 ntBASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 AL033527.5-201ENST00000641382 801 ntBASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGA11Q9Y5H2 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 EIF3FP3-201ENST00000434851 1086 ntBASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 AC022137.2-201ENST00000503482 481 ntBASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 AC026434.2-201ENST00000506094 1078 ntBASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGA11Q9Y5H2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms