Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 AL157792.1-201ENST00000488281 530 ntBASIC17.34■□□□□ 0.37
EFCC1Q9HA90 AC026434.2-201ENST00000506094 1078 ntBASIC17.34■□□□□ 0.37
EFCC1Q9HA90 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 AP002803.1-201ENST00000528836 498 ntBASIC17.34■□□□□ 0.37
EFCC1Q9HA90 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 AC010491.1-201ENST00000563101 2797 ntBASIC17.34■□□□□ 0.37
EFCC1Q9HA90 DNM1P30-201ENST00000563586 452 ntBASIC17.34■□□□□ 0.37
EFCC1Q9HA90 AL603832.2-201ENST00000566195 2125 ntBASIC17.34■□□□□ 0.37
EFCC1Q9HA90 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 SNORD3B-2-202ENST00000571722 791 ntBASIC17.34■□□□□ 0.37
EFCC1Q9HA90 MIR4783-201ENST00000580343 82 ntBASIC17.34■□□□□ 0.37
EFCC1Q9HA90 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 YRDCP1-201ENST00000621419 643 ntBASIC17.34■□□□□ 0.37
EFCC1Q9HA90 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.34■□□□□ 0.37
EFCC1Q9HA90 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EFCC1Q9HA90 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 FKBP4P6-201ENST00000457486 1332 ntBASIC17.33■□□□□ 0.36
EFCC1Q9HA90 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 RCC2P8-201ENST00000502779 1035 ntBASIC17.33■□□□□ 0.36
EFCC1Q9HA90 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 AL031713.1-201ENST00000564813 661 ntBASIC17.33■□□□□ 0.36
EFCC1Q9HA90 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 AC005089.1-201ENST00000619486 2241 ntBASIC17.33■□□□□ 0.36
EFCC1Q9HA90 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 AL157414.3-201ENST00000624276 1954 ntBASIC17.33■□□□□ 0.36
EFCC1Q9HA90 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC17.33■□□□□ 0.36
EFCC1Q9HA90 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFCC1Q9HA90 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms