Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 AC015909.5-201ENST00000624336 2266 ntBASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 RPS20P25-201ENST00000412447 352 ntBASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 AL671277.1-201ENST00000429656 993 ntBASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 AL353708.1-201ENST00000567904 1257 ntBASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 AP000842.3-202ENST00000569238 1080 ntBASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 AC016397.2-201ENST00000624848 1985 ntBASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SSBP4Q9BWG4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 AC004870.1-201ENST00000315132 882 ntBASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 FO393414.2-201ENST00000405153 598 ntBASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 AL355306.1-201ENST00000415580 579 ntBASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 RN7SL589P-201ENST00000481268 310 ntBASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 AC117500.1-201ENST00000497352 755 ntBASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 KRT8P23-201ENST00000560090 1207 ntBASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 AC135178.5-201ENST00000602597 674 ntBASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 AC144521.1-201ENST00000607148 956 ntBASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 AL645728.2-202ENST00000641679 227 ntBASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 MIR193BHG-211ENST00000641433 5365 ntBASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.36□□□□□ -0.59
SSBP4Q9BWG4 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms