Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 AC006504.5-208ENST00000588784 2401 ntBASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 AC006001.1-201ENST00000325130 474 ntBASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 FTH1P14-201ENST00000482930 551 ntBASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 SORD2P-201ENST00000558556 1069 ntBASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 AC016397.2-201ENST00000624848 1985 ntBASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM5Q96HC4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 COX5BP8-201ENST00000416911 349 ntBASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 ARSEP1-201ENST00000420443 635 ntBASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 NME2P1-201ENST00000426182 414 ntBASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 FAM197Y7-201ENST00000432892 766 ntBASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 AC007551.1-201ENST00000457394 519 ntBASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 OR10B1P-201ENST00000601666 907 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms