Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC104596.2-201ENST00000512793 793 ntBASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 AC055876.2-201ENST00000531834 546 ntBASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLHC1Q8NHS4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 SLC7A15P-201ENST00000424028 1363 ntBASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 AC098850.1-201ENST00000419919 790 ntBASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 MEP1AP4-201ENST00000423244 1087 ntBASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 AL359711.2-201ENST00000563105 872 ntBASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 AC006538.3-201ENST00000612495 578 ntBASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLHC1Q8NHS4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 AC010327.5-201ENST00000586923 3061 ntBASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms