Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 RN7SL399P-201ENST00000471648 279 ntBASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 RPL13AP25-201ENST00000484130 612 ntBASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 AC090505.1-201ENST00000430515 1834 ntBASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 AC016397.2-201ENST00000624848 1985 ntBASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 INE2-201ENST00000630399 1874 ntBASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN22Q8N7P3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 AC099521.3-201ENST00000624251 2938 ntBASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 PPT1-213ENST00000641319 2388 ntBASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 AL139094.1-201ENST00000405549 1188 ntBASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
CLDN22Q8N7P3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms