Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 HLA-J-203ENST00000494367 1087 ntBASIC16.45■□□□□ 0.22
TSR1Q2NL82 AC022447.6-201ENST00000515522 438 ntBASIC16.45■□□□□ 0.22
TSR1Q2NL82 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 AC004461.2-201ENST00000629517 803 ntBASIC16.45■□□□□ 0.22
TSR1Q2NL82 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.45■□□□□ 0.22
TSR1Q2NL82 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TSR1Q2NL82 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 PCDHA5-203ENST00000614258 4248 ntBASIC16.44■□□□□ 0.22
TSR1Q2NL82 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 AC069262.1-201ENST00000539058 672 ntBASIC16.44■□□□□ 0.22
TSR1Q2NL82 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 AL512361.1-201ENST00000554200 418 ntBASIC16.44■□□□□ 0.22
TSR1Q2NL82 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 TMEM14EP-202ENST00000639378 1296 ntBASIC16.44■□□□□ 0.22
TSR1Q2NL82 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 STK40-201ENST00000359297 4837 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms