Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.78□□□□□ -0.2
PRKCDQ05655 AC036164.1-201ENST00000570544 333 ntBASIC13.78□□□□□ -0.2
PRKCDQ05655 AC107373.2-201ENST00000607735 490 ntBASIC13.78□□□□□ -0.2
PRKCDQ05655 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.78□□□□□ -0.2
PRKCDQ05655 AC004840.1-201ENST00000636359 365 ntBASIC13.78□□□□□ -0.2
PRKCDQ05655 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PRKCDQ05655 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.78□□□□□ -0.2
PRKCDQ05655 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.78□□□□□ -0.2
PRKCDQ05655 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PRKCDQ05655 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
PRKCDQ05655 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.77□□□□□ -0.2
PRKCDQ05655 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.77□□□□□ -0.2
PRKCDQ05655 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PRKCDQ05655 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PRKCDQ05655 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PRKCDQ05655 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PRKCDQ05655 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
PRKCDQ05655 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PRKCDQ05655 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PRKCDQ05655 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PRKCDQ05655 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCDQ05655 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.77□□□□□ -0.21
PRKCDQ05655 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.77□□□□□ -0.21
PRKCDQ05655 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.77□□□□□ -0.21
PRKCDQ05655 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCDQ05655 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
PRKCDQ05655 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.77□□□□□ -0.21
PRKCDQ05655 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.77□□□□□ -0.21
PRKCDQ05655 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCDQ05655 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.77□□□□□ -0.21
PRKCDQ05655 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.77□□□□□ -0.21
PRKCDQ05655 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.77□□□□□ -0.21
PRKCDQ05655 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.77□□□□□ -0.21
PRKCDQ05655 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
PRKCDQ05655 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCDQ05655 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCDQ05655 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCDQ05655 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.77□□□□□ -0.21
PRKCDQ05655 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCDQ05655 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PRKCDQ05655 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 AC008738.7-201ENST00000609744 511 ntBASIC13.77□□□□□ -0.21
PRKCDQ05655 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PRKCDQ05655 AC023090.2-201ENST00000625182 2110 ntBASIC13.77□□□□□ -0.21
PRKCDQ05655 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.77□□□□□ -0.21
PRKCDQ05655 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.77□□□□□ -0.21
PRKCDQ05655 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PRKCDQ05655 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PRKCDQ05655 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCDQ05655 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCDQ05655 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PRKCDQ05655 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PRKCDQ05655 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PRKCDQ05655 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.76□□□□□ -0.21
PRKCDQ05655 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PRKCDQ05655 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
PRKCDQ05655 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCDQ05655 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCDQ05655 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.76□□□□□ -0.21
PRKCDQ05655 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCDQ05655 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PRKCDQ05655 AC022144.1-201ENST00000602255 1580 ntBASIC13.76□□□□□ -0.21
PRKCDQ05655 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCDQ05655 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms