Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC079328.1-201ENST00000560358 952 ntBASIC13.22□□□□□ -0.29
NKX6-1P78426 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.22□□□□□ -0.29
NKX6-1P78426 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.22□□□□□ -0.29
NKX6-1P78426 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
NKX6-1P78426 AL008638.5-201ENST00000623814 1298 ntBASIC13.22□□□□□ -0.29
NKX6-1P78426 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NKX6-1P78426 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
NKX6-1P78426 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NKX6-1P78426 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NKX6-1P78426 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX6-1P78426 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX6-1P78426 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NKX6-1P78426 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX6-1P78426 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-1P78426 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.21□□□□□ -0.29
NKX6-1P78426 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
NKX6-1P78426 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NKX6-1P78426 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NKX6-1P78426 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.21□□□□□ -0.29
NKX6-1P78426 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.21□□□□□ -0.29
NKX6-1P78426 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.21□□□□□ -0.29
NKX6-1P78426 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
NKX6-1P78426 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 GHSR-202ENST00000427970 912 ntBASIC13.21□□□□□ -0.29
NKX6-1P78426 AC007969.1-201ENST00000433675 447 ntBASIC13.21□□□□□ -0.29
NKX6-1P78426 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.21□□□□□ -0.29
NKX6-1P78426 ACTG1P17-201ENST00000558391 1119 ntBASIC13.21□□□□□ -0.29
NKX6-1P78426 AC025279.2-201ENST00000569730 653 ntBASIC13.21□□□□□ -0.29
NKX6-1P78426 GNRHR2-203ENST00000581100 1187 ntBASIC13.21□□□□□ -0.29
NKX6-1P78426 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NKX6-1P78426 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.21□□□□□ -0.29
NKX6-1P78426 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.21□□□□□ -0.29
NKX6-1P78426 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.21□□□□□ -0.29
NKX6-1P78426 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.21□□□□□ -0.29
NKX6-1P78426 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
NKX6-1P78426 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.21□□□□□ -0.29
NKX6-1P78426 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
NKX6-1P78426 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-1P78426 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.21□□□□□ -0.29
NKX6-1P78426 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.21□□□□□ -0.3
NKX6-1P78426 TMBIM7P-203ENST00000641617 1718 ntBASIC13.21□□□□□ -0.3
NKX6-1P78426 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-1P78426 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-1P78426 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-1P78426 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.21□□□□□ -0.3
NKX6-1P78426 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
NKX6-1P78426 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-1P78426 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-1P78426 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.21□□□□□ -0.3
NKX6-1P78426 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
NKX6-1P78426 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-1P78426 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
NKX6-1P78426 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-1P78426 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.21□□□□□ -0.3
NKX6-1P78426 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NKX6-1P78426 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
NKX6-1P78426 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 AC015656.1-201ENST00000624209 3578 ntBASIC13.2□□□□□ -0.3
NKX6-1P78426 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NKX6-1P78426 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NKX6-1P78426 AHCYP2-201ENST00000430630 1300 ntBASIC13.2□□□□□ -0.3
NKX6-1P78426 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-1P78426 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX6-1P78426 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms