Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.37□□□□□ -0.27
CAV3P56539 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.37□□□□□ -0.27
CAV3P56539 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.37□□□□□ -0.27
CAV3P56539 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CAV3P56539 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.37□□□□□ -0.27
CAV3P56539 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.37□□□□□ -0.27
CAV3P56539 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 KLF2P3-201ENST00000451977 1087 ntBASIC13.37□□□□□ -0.27
CAV3P56539 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.37□□□□□ -0.27
CAV3P56539 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.37□□□□□ -0.27
CAV3P56539 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.37□□□□□ -0.27
CAV3P56539 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.37□□□□□ -0.27
CAV3P56539 AC051619.7-201ENST00000568314 623 ntBASIC13.37□□□□□ -0.27
CAV3P56539 RN7SL828P-201ENST00000607615 303 ntBASIC13.37□□□□□ -0.27
CAV3P56539 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.37□□□□□ -0.27
CAV3P56539 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
CAV3P56539 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.37□□□□□ -0.27
CAV3P56539 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.37□□□□□ -0.27
CAV3P56539 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CAV3P56539 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CAV3P56539 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CAV3P56539 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.36□□□□□ -0.27
CAV3P56539 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
CAV3P56539 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CAV3P56539 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.36□□□□□ -0.27
CAV3P56539 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CAV3P56539 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CAV3P56539 LILRP1-201ENST00000444199 1370 ntBASIC13.36□□□□□ -0.27
CAV3P56539 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CAV3P56539 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.36□□□□□ -0.27
CAV3P56539 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.36□□□□□ -0.27
CAV3P56539 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.36□□□□□ -0.27
CAV3P56539 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CAV3P56539 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.36□□□□□ -0.27
CAV3P56539 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.36□□□□□ -0.27
CAV3P56539 PMS2P2-201ENST00000425039 1128 ntBASIC13.36□□□□□ -0.27
CAV3P56539 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.36□□□□□ -0.27
CAV3P56539 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 AC125807.1-201ENST00000483097 614 ntBASIC13.36□□□□□ -0.27
CAV3P56539 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.36□□□□□ -0.27
CAV3P56539 BANF1P1-201ENST00000553684 263 ntBASIC13.36□□□□□ -0.27
CAV3P56539 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.36□□□□□ -0.27
CAV3P56539 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.36□□□□□ -0.27
CAV3P56539 AC140878.1-201ENST00000565277 250 ntBASIC13.36□□□□□ -0.27
CAV3P56539 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.36□□□□□ -0.27
CAV3P56539 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.36□□□□□ -0.27
CAV3P56539 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.36□□□□□ -0.27
CAV3P56539 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.36□□□□□ -0.27
CAV3P56539 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.36□□□□□ -0.27
CAV3P56539 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CAV3P56539 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CAV3P56539 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms