Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRPF1P55201 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
BRPF1P55201 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
BRPF1P55201 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
BRPF1P55201 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.89■□□□□ 0.62
BRPF1P55201 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
BRPF1P55201 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.89■□□□□ 0.61
BRPF1P55201 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 AC253536.4-201ENST00000440539 267 ntBASIC18.89■□□□□ 0.61
BRPF1P55201 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 AC132872.1-201ENST00000566986 1195 ntBASIC18.89■□□□□ 0.61
BRPF1P55201 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.89■□□□□ 0.61
BRPF1P55201 PPY2P-201ENST00000582808 702 ntBASIC18.89■□□□□ 0.61
BRPF1P55201 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.89■□□□□ 0.61
BRPF1P55201 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.89■□□□□ 0.61
BRPF1P55201 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.89■□□□□ 0.61
BRPF1P55201 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 KRT8P28-201ENST00000433288 1390 ntBASIC18.89■□□□□ 0.61
BRPF1P55201 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.89■□□□□ 0.61
BRPF1P55201 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BRPF1P55201 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.89■□□□□ 0.61
BRPF1P55201 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.88■□□□□ 0.61
BRPF1P55201 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.88■□□□□ 0.61
BRPF1P55201 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC18.88■□□□□ 0.61
BRPF1P55201 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
BRPF1P55201 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.88■□□□□ 0.61
BRPF1P55201 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.88■□□□□ 0.61
BRPF1P55201 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.88■□□□□ 0.61
BRPF1P55201 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.88■□□□□ 0.61
BRPF1P55201 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.88■□□□□ 0.61
BRPF1P55201 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
BRPF1P55201 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.88■□□□□ 0.61
BRPF1P55201 MIR4783-201ENST00000580343 82 ntBASIC18.88■□□□□ 0.61
BRPF1P55201 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.88■□□□□ 0.61
BRPF1P55201 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.88■□□□□ 0.61
BRPF1P55201 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.88■□□□□ 0.61
BRPF1P55201 AC215219.1-201ENST00000400706 1817 ntBASIC18.88■□□□□ 0.61
BRPF1P55201 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.88■□□□□ 0.61
BRPF1P55201 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRPF1P55201 AC006504.5-208ENST00000588784 2401 ntBASIC18.88■□□□□ 0.61
BRPF1P55201 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.87■□□□□ 0.61
BRPF1P55201 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
BRPF1P55201 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
BRPF1P55201 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
BRPF1P55201 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.87■□□□□ 0.61
BRPF1P55201 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.87■□□□□ 0.61
BRPF1P55201 HIST2H2BB-201ENST00000449108 381 ntBASIC18.87■□□□□ 0.61
BRPF1P55201 CICP12-201ENST00000455801 843 ntBASIC18.87■□□□□ 0.61
BRPF1P55201 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.87■□□□□ 0.61
BRPF1P55201 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.87■□□□□ 0.61
BRPF1P55201 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.87■□□□□ 0.61
BRPF1P55201 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.87■□□□□ 0.61
BRPF1P55201 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.87■□□□□ 0.61
BRPF1P55201 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 AC005089.1-201ENST00000619486 2241 ntBASIC18.87■□□□□ 0.61
BRPF1P55201 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
BRPF1P55201 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
BRPF1P55201 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms