Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC004898.1-201ENST00000451057 766 ntBASIC15.34■□□□□ 0.05
ATXN3P54252 HOMER2P2-201ENST00000451621 847 ntBASIC15.34■□□□□ 0.05
ATXN3P54252 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.34■□□□□ 0.05
ATXN3P54252 AC079328.1-201ENST00000560358 952 ntBASIC15.34■□□□□ 0.05
ATXN3P54252 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.34■□□□□ 0.05
ATXN3P54252 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.34■□□□□ 0.05
ATXN3P54252 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.34■□□□□ 0.05
ATXN3P54252 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ATXN3P54252 AC107373.2-201ENST00000607735 490 ntBASIC15.34■□□□□ 0.05
ATXN3P54252 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.34■□□□□ 0.05
ATXN3P54252 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.34■□□□□ 0.05
ATXN3P54252 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.34■□□□□ 0.05
ATXN3P54252 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ATXN3P54252 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.33■□□□□ 0.05
ATXN3P54252 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.33■□□□□ 0.05
ATXN3P54252 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.33■□□□□ 0.05
ATXN3P54252 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
ATXN3P54252 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.33■□□□□ 0.05
ATXN3P54252 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ATXN3P54252 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATXN3P54252 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.33■□□□□ 0.05
ATXN3P54252 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATXN3P54252 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATXN3P54252 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.33■□□□□ 0.05
ATXN3P54252 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.33■□□□□ 0.04
ATXN3P54252 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.33■□□□□ 0.04
ATXN3P54252 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 MIR1202-201ENST00000408529 83 ntBASIC15.33■□□□□ 0.04
ATXN3P54252 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.33■□□□□ 0.04
ATXN3P54252 AC136604.1-201ENST00000418535 575 ntBASIC15.33■□□□□ 0.04
ATXN3P54252 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 FNTAP2-201ENST00000430308 634 ntBASIC15.33■□□□□ 0.04
ATXN3P54252 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.33■□□□□ 0.04
ATXN3P54252 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.33■□□□□ 0.04
ATXN3P54252 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.33■□□□□ 0.04
ATXN3P54252 AL591846.1-201ENST00000451736 433 ntBASIC15.33■□□□□ 0.04
ATXN3P54252 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 AC091804.1-201ENST00000486888 567 ntBASIC15.33■□□□□ 0.04
ATXN3P54252 ACTG1P17-201ENST00000558391 1119 ntBASIC15.33■□□□□ 0.04
ATXN3P54252 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.33■□□□□ 0.04
ATXN3P54252 AC015910.1-201ENST00000579400 975 ntBASIC15.33■□□□□ 0.04
ATXN3P54252 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.33■□□□□ 0.04
ATXN3P54252 AC132938.4-201ENST00000623835 848 ntBASIC15.33■□□□□ 0.04
ATXN3P54252 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 LINC01230-201ENST00000625222 3017 ntBASIC15.33■□□□□ 0.04
ATXN3P54252 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.33■□□□□ 0.04
ATXN3P54252 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ATXN3P54252 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
ATXN3P54252 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.33■□□□□ 0.04
ATXN3P54252 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.33■□□□□ 0.04
ATXN3P54252 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ATXN3P54252 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 DRD5P1-201ENST00000456605 1438 ntBASIC15.33■□□□□ 0.04
ATXN3P54252 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.33■□□□□ 0.04
ATXN3P54252 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATXN3P54252 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.32■□□□□ 0.04
ATXN3P54252 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ATXN3P54252 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.32■□□□□ 0.04
ATXN3P54252 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.32■□□□□ 0.04
ATXN3P54252 AC005077.2-201ENST00000449786 690 ntBASIC15.32■□□□□ 0.04
ATXN3P54252 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.32■□□□□ 0.04
ATXN3P54252 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ATXN3P54252 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.32■□□□□ 0.04
ATXN3P54252 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATXN3P54252 AC005695.3-201ENST00000614522 232 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms