Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC25A1P53007 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SLC25A1P53007 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.24□□□□□ -0.29
SLC25A1P53007 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SLC25A1P53007 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SLC25A1P53007 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SLC25A1P53007 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC25A1P53007 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.23□□□□□ -0.29
SLC25A1P53007 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SLC25A1P53007 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SLC25A1P53007 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SLC25A1P53007 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SLC25A1P53007 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 AC012617.1-204ENST00000586340 2305 ntBASIC13.23□□□□□ -0.29
SLC25A1P53007 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.23□□□□□ -0.29
SLC25A1P53007 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC25A1P53007 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SLC25A1P53007 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.23□□□□□ -0.29
SLC25A1P53007 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC25A1P53007 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 RN7SKP230-201ENST00000365642 335 ntBASIC13.23□□□□□ -0.29
SLC25A1P53007 AC087499.6-201ENST00000411576 835 ntBASIC13.23□□□□□ -0.29
SLC25A1P53007 AC098850.1-201ENST00000419919 790 ntBASIC13.23□□□□□ -0.29
SLC25A1P53007 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.23□□□□□ -0.29
SLC25A1P53007 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC25A1P53007 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.23□□□□□ -0.29
SLC25A1P53007 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC25A1P53007 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.23□□□□□ -0.29
SLC25A1P53007 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.23□□□□□ -0.29
SLC25A1P53007 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.23□□□□□ -0.29
SLC25A1P53007 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC25A1P53007 AC004466.1-201ENST00000599515 1080 ntBASIC13.23□□□□□ -0.29
SLC25A1P53007 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.23□□□□□ -0.29
SLC25A1P53007 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.23□□□□□ -0.29
SLC25A1P53007 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.23□□□□□ -0.29
SLC25A1P53007 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.23□□□□□ -0.29
SLC25A1P53007 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC25A1P53007 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SLC25A1P53007 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
SLC25A1P53007 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
SLC25A1P53007 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC25A1P53007 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SLC25A1P53007 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLC25A1P53007 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLC25A1P53007 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC25A1P53007 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC25A1P53007 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLC25A1P53007 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.22□□□□□ -0.29
SLC25A1P53007 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.22□□□□□ -0.29
SLC25A1P53007 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.22□□□□□ -0.29
SLC25A1P53007 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.22□□□□□ -0.29
SLC25A1P53007 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.22□□□□□ -0.29
SLC25A1P53007 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLC25A1P53007 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SLC25A1P53007 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.22□□□□□ -0.29
SLC25A1P53007 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC25A1P53007 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC25A1P53007 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SLC25A1P53007 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLC25A1P53007 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.22□□□□□ -0.29
SLC25A1P53007 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.22□□□□□ -0.29
SLC25A1P53007 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.22□□□□□ -0.29
SLC25A1P53007 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLC25A1P53007 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC25A1P53007 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC25A1P53007 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC25A1P53007 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms