Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 RPL8P2-201ENST00000430538 502 ntBASIC15.55■□□□□ 0.08
CLCN4P51793 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.55■□□□□ 0.08
CLCN4P51793 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.55■□□□□ 0.08
CLCN4P51793 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CLCN4P51793 MIR3677-201ENST00000578964 60 ntBASIC15.55■□□□□ 0.08
CLCN4P51793 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.55■□□□□ 0.08
CLCN4P51793 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.55■□□□□ 0.08
CLCN4P51793 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.55■□□□□ 0.08
CLCN4P51793 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 AC138894.2-201ENST00000602838 371 ntBASIC15.55■□□□□ 0.08
CLCN4P51793 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 YRDCP1-201ENST00000621419 643 ntBASIC15.55■□□□□ 0.08
CLCN4P51793 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
CLCN4P51793 AC023024.2-201ENST00000623561 1993 ntBASIC15.55■□□□□ 0.08
CLCN4P51793 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CLCN4P51793 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN4P51793 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLCN4P51793 LINC00554-201ENST00000564841 3011 ntBASIC15.54■□□□□ 0.08
CLCN4P51793 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.54■□□□□ 0.08
CLCN4P51793 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 MROH4P-201ENST00000431302 1578 ntBASIC15.54■□□□□ 0.08
CLCN4P51793 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 AC013726.1-201ENST00000563747 2285 ntBASIC15.54■□□□□ 0.08
CLCN4P51793 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 AC074138.1-201ENST00000611182 1303 ntBASIC15.54■□□□□ 0.08
CLCN4P51793 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.54■□□□□ 0.08
CLCN4P51793 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCN4P51793 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.54■□□□□ 0.08
CLCN4P51793 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.54■□□□□ 0.08
CLCN4P51793 RBM8B-201ENST00000555532 525 ntBASIC15.54■□□□□ 0.08
CLCN4P51793 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCN4P51793 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCN4P51793 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCN4P51793 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.54■□□□□ 0.08
CLCN4P51793 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLCN4P51793 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CLCN4P51793 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCN4P51793 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.54■□□□□ 0.08
CLCN4P51793 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLCN4P51793 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN4P51793 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CLCN4P51793 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.53■□□□□ 0.08
CLCN4P51793 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLCN4P51793 AC138035.3-201ENST00000622706 2791 ntBASIC15.53■□□□□ 0.08
CLCN4P51793 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLCN4P51793 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CLCN4P51793 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCN4P51793 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.53■□□□□ 0.08
CLCN4P51793 RN7SL8P-201ENST00000461771 266 ntBASIC15.53■□□□□ 0.08
CLCN4P51793 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCN4P51793 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms