Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
DHFRP00374 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
DHFRP00374 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DHFRP00374 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
DHFRP00374 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
DHFRP00374 KRT8P37-201ENST00000451609 1420 ntBASIC12.97□□□□□ -0.33
DHFRP00374 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
DHFRP00374 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
DHFRP00374 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
DHFRP00374 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.97□□□□□ -0.33
DHFRP00374 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.97□□□□□ -0.33
DHFRP00374 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
DHFRP00374 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
DHFRP00374 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.97□□□□□ -0.33
DHFRP00374 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.97□□□□□ -0.33
DHFRP00374 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
DHFRP00374 AC140658.5-201ENST00000438532 169 ntBASIC12.97□□□□□ -0.33
DHFRP00374 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.97□□□□□ -0.33
DHFRP00374 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.97□□□□□ -0.33
DHFRP00374 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.97□□□□□ -0.33
DHFRP00374 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.97□□□□□ -0.33
DHFRP00374 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
DHFRP00374 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.97□□□□□ -0.33
DHFRP00374 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.97□□□□□ -0.33
DHFRP00374 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.97□□□□□ -0.33
DHFRP00374 AL009183.1-201ENST00000603760 355 ntBASIC12.97□□□□□ -0.33
DHFRP00374 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.97□□□□□ -0.33
DHFRP00374 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 AL354702.1-201ENST00000442006 1960 ntBASIC12.97□□□□□ -0.33
DHFRP00374 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
DHFRP00374 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
DHFRP00374 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
DHFRP00374 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
DHFRP00374 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
DHFRP00374 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.97□□□□□ -0.33
DHFRP00374 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.97□□□□□ -0.33
DHFRP00374 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.97□□□□□ -0.33
DHFRP00374 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
DHFRP00374 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DHFRP00374 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.96□□□□□ -0.33
DHFRP00374 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.96□□□□□ -0.33
DHFRP00374 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
DHFRP00374 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.96□□□□□ -0.33
DHFRP00374 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.96□□□□□ -0.33
DHFRP00374 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
DHFRP00374 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.96□□□□□ -0.33
DHFRP00374 PCDHB18P-202ENST00000526308 3197 ntBASIC12.96□□□□□ -0.33
DHFRP00374 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 IL9RP2-201ENST00000423948 1312 ntBASIC12.96□□□□□ -0.33
DHFRP00374 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.96□□□□□ -0.33
DHFRP00374 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
DHFRP00374 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DHFRP00374 AC002056.1-201ENST00000395613 760 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms