Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.28□□□□□ -0.44
CLN5O75503 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CLN5O75503 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.28□□□□□ -0.44
CLN5O75503 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CLN5O75503 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.28□□□□□ -0.44
CLN5O75503 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.28□□□□□ -0.44
CLN5O75503 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.28□□□□□ -0.44
CLN5O75503 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CLN5O75503 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.28□□□□□ -0.44
CLN5O75503 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.28□□□□□ -0.44
CLN5O75503 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.28□□□□□ -0.44
CLN5O75503 AL513210.1-201ENST00000629608 234 ntBASIC12.28□□□□□ -0.44
CLN5O75503 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
CLN5O75503 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.28□□□□□ -0.44
CLN5O75503 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CLN5O75503 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.28□□□□□ -0.44
CLN5O75503 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CLN5O75503 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CLN5O75503 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLN5O75503 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
CLN5O75503 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CLN5O75503 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLN5O75503 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.27□□□□□ -0.44
CLN5O75503 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
CLN5O75503 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.27□□□□□ -0.44
CLN5O75503 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLN5O75503 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.27□□□□□ -0.44
CLN5O75503 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.27□□□□□ -0.44
CLN5O75503 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
CLN5O75503 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLN5O75503 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLN5O75503 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLN5O75503 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLN5O75503 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.27□□□□□ -0.44
CLN5O75503 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLN5O75503 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLN5O75503 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.27□□□□□ -0.44
CLN5O75503 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN5O75503 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN5O75503 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN5O75503 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN5O75503 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.27□□□□□ -0.45
CLN5O75503 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CLN5O75503 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLN5O75503 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.27□□□□□ -0.45
CLN5O75503 RPL5P21-201ENST00000404620 815 ntBASIC12.27□□□□□ -0.45
CLN5O75503 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLN5O75503 SPDYE17-201ENST00000412399 783 ntBASIC12.27□□□□□ -0.45
CLN5O75503 AL627223.1-201ENST00000416693 442 ntBASIC12.27□□□□□ -0.45
CLN5O75503 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.27□□□□□ -0.45
CLN5O75503 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.27□□□□□ -0.45
CLN5O75503 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.27□□□□□ -0.45
CLN5O75503 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.27□□□□□ -0.45
CLN5O75503 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CLN5O75503 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.27□□□□□ -0.45
CLN5O75503 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms