Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 LINC00528-201ENST00000600723 2160 ntBASIC12.94□□□□□ -0.34
MBD3L3A6NE82 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 FLJ16779-201ENST00000612722 7638 ntBASIC12.94□□□□□ -0.34
MBD3L3A6NE82 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 HINT2P1-201ENST00000419438 481 ntBASIC12.94□□□□□ -0.34
MBD3L3A6NE82 TSPY25P-201ENST00000429463 745 ntBASIC12.94□□□□□ -0.34
MBD3L3A6NE82 OR2R1P-201ENST00000441404 914 ntBASIC12.94□□□□□ -0.34
MBD3L3A6NE82 FTLP1-201ENST00000449155 526 ntBASIC12.94□□□□□ -0.34
MBD3L3A6NE82 CEP164P1-201ENST00000455142 418 ntBASIC12.94□□□□□ -0.34
MBD3L3A6NE82 TMEM198B-204ENST00000484016 896 ntBASIC12.94□□□□□ -0.34
MBD3L3A6NE82 PGAM1P5-201ENST00000548011 764 ntBASIC12.94□□□□□ -0.34
MBD3L3A6NE82 AC027237.1-201ENST00000560942 655 ntBASIC12.94□□□□□ -0.34
MBD3L3A6NE82 PRKXP1-201ENST00000561423 1122 ntBASIC12.94□□□□□ -0.34
MBD3L3A6NE82 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L3A6NE82 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 TCAF2P1-201ENST00000291129 2421 ntBASIC12.93□□□□□ -0.34
MBD3L3A6NE82 AC006504.5-208ENST00000588784 2401 ntBASIC12.93□□□□□ -0.34
MBD3L3A6NE82 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.93□□□□□ -0.34
MBD3L3A6NE82 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms