Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HFM1A2PYH4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC21.6■■□□□ 1.05
HFM1A2PYH4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
HFM1A2PYH4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
HFM1A2PYH4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HFM1A2PYH4 FRMPD2B-201ENST00000431305 1347 ntBASIC21.6■■□□□ 1.05
HFM1A2PYH4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
HFM1A2PYH4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HFM1A2PYH4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC21.6■■□□□ 1.05
HFM1A2PYH4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HFM1A2PYH4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HFM1A2PYH4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC21.6■■□□□ 1.05
HFM1A2PYH4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
HFM1A2PYH4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HFM1A2PYH4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HFM1A2PYH4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HFM1A2PYH4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC21.6■■□□□ 1.05
HFM1A2PYH4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HFM1A2PYH4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC21.6■■□□□ 1.05
HFM1A2PYH4 AL353637.1-201ENST00000451571 732 ntBASIC21.6■■□□□ 1.05
HFM1A2PYH4 CEP164P1-201ENST00000455142 418 ntBASIC21.6■■□□□ 1.05
HFM1A2PYH4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC21.6■■□□□ 1.05
HFM1A2PYH4 PHBP15-201ENST00000574228 665 ntBASIC21.6■■□□□ 1.05
HFM1A2PYH4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
HFM1A2PYH4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HFM1A2PYH4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC21.6■■□□□ 1.05
HFM1A2PYH4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
HFM1A2PYH4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HFM1A2PYH4 AC097359.2-201ENST00000604992 2389 ntBASIC21.6■■□□□ 1.05
HFM1A2PYH4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HFM1A2PYH4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
HFM1A2PYH4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HFM1A2PYH4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
HFM1A2PYH4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HFM1A2PYH4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
HFM1A2PYH4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HFM1A2PYH4 SUPT4H1P2-201ENST00000501248 353 ntBASIC21.59■■□□□ 1.05
HFM1A2PYH4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
HFM1A2PYH4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC21.59■■□□□ 1.05
HFM1A2PYH4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC21.59■■□□□ 1.05
HFM1A2PYH4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
HFM1A2PYH4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HFM1A2PYH4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC21.59■■□□□ 1.05
HFM1A2PYH4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HFM1A2PYH4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HFM1A2PYH4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
HFM1A2PYH4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HFM1A2PYH4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HFM1A2PYH4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HFM1A2PYH4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HFM1A2PYH4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
HFM1A2PYH4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HFM1A2PYH4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HFM1A2PYH4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HFM1A2PYH4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
HFM1A2PYH4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HFM1A2PYH4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC21.58■■□□□ 1.05
HFM1A2PYH4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HFM1A2PYH4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC21.58■■□□□ 1.05
HFM1A2PYH4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HFM1A2PYH4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC21.58■■□□□ 1.05
HFM1A2PYH4 RN7SL769P-201ENST00000469386 295 ntBASIC21.58■■□□□ 1.05
HFM1A2PYH4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC21.58■■□□□ 1.05
HFM1A2PYH4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC21.58■■□□□ 1.05
HFM1A2PYH4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HFM1A2PYH4 AL109837.1-201ENST00000603272 613 ntBASIC21.58■■□□□ 1.05
HFM1A2PYH4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HFM1A2PYH4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HFM1A2PYH4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
HFM1A2PYH4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC21.58■■□□□ 1.04
HFM1A2PYH4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HFM1A2PYH4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
HFM1A2PYH4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC21.58■■□□□ 1.04
HFM1A2PYH4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC21.58■■□□□ 1.04
HFM1A2PYH4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
HFM1A2PYH4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HFM1A2PYH4 BX640514.1-201ENST00000583223 1918 ntBASIC21.57■■□□□ 1.04
HFM1A2PYH4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms