Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 AC074138.1-201ENST00000611182 1303 ntBASIC14.35□□□□□ -0.11
LHX6Q9UPM6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 KRT8P29-201ENST00000420409 1371 ntBASIC14.34□□□□□ -0.11
LHX6Q9UPM6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 PHKG1P2-201ENST00000457537 863 ntBASIC14.34□□□□□ -0.11
LHX6Q9UPM6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 AL133330.1-201ENST00000510619 704 ntTSL 5 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 CARD8-224ENST00000522431 622 ntTSL 2 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 AL031713.1-201ENST00000564813 661 ntBASIC14.34□□□□□ -0.11
LHX6Q9UPM6 AC005951.1-201ENST00000576706 485 ntBASIC14.34□□□□□ -0.11
LHX6Q9UPM6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 AC233280.19-201ENST00000633223 136 ntBASIC14.34□□□□□ -0.11
LHX6Q9UPM6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LHX6Q9UPM6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LHX6Q9UPM6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
LHX6Q9UPM6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LHX6Q9UPM6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
LHX6Q9UPM6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.33□□□□□ -0.11
LHX6Q9UPM6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.33□□□□□ -0.11
LHX6Q9UPM6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
LHX6Q9UPM6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
LHX6Q9UPM6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
LHX6Q9UPM6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.33□□□□□ -0.11
LHX6Q9UPM6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.33□□□□□ -0.11
LHX6Q9UPM6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LHX6Q9UPM6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LHX6Q9UPM6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 AP001282.1-201ENST00000531301 1499 ntBASIC14.33□□□□□ -0.12
LHX6Q9UPM6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 AC063926.3-201ENST00000624734 5658 ntBASIC14.33□□□□□ -0.12
LHX6Q9UPM6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LHX6Q9UPM6 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms