RNA–Protein interactions for RNA: ENST00000447125.5

LINC00189-203, long intergenic non-protein coding RNA 189, humanhuman

TSL 3 BASIC

Gene LINC00189, Length 783 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00189-203ENST00000447125 AEBP2Q6ZN18 517 aaPredicted RBP33.54■■■□□ 2.96
LINC00189-203ENST00000447125 CHIC1Q5VXU3 224 aa31.72■■■□□ 2.67
LINC00189-203ENST00000447125 SENP3Q9H4L4 574 aaPredicted RBP28.46■■■□□ 2.15
LINC00189-203ENST00000447125 PHF23Q9BUL5 403 aaPredicted RBP28.18■■■□□ 2.1
LINC00189-203ENST00000447125 FOXD1Q16676 465 aa26.65■■□□□ 1.86
LINC00189-203ENST00000447125 PLPPR3Q6T4P5 718 aa25.27■■□□□ 1.64
LINC00189-203ENST00000447125 PPP6R1Q9UPN7 881 aa24.95■■□□□ 1.58
LINC00189-203ENST00000447125 ADRA2BP18089 450 aa24.85■■□□□ 1.57
LINC00189-203ENST00000447125 PIAS4Q8N2W9 510 aaPredicted RBP24.85■■□□□ 1.57
LINC00189-203ENST00000447125 MSH5O43196 834 aa24.82■■□□□ 1.56
LINC00189-203ENST00000447125 POTEDQ86YR6 584 aa24.42■■□□□ 1.5
LINC00189-203ENST00000447125 MAPK8IP2Q13387 824 aaPredicted RBP22.88■■□□□ 1.25
LINC00189-203ENST00000447125 DMRT2Q9Y5R5 561 aa22.6■■□□□ 1.21
LINC00189-203ENST00000447125 SCAF1Q9H7N4 1312 aaKnown RBP22.56■■□□□ 1.2
LINC00189-203ENST00000447125 PPP4R3CPQ6ZMV5 832 aa22.22■■□□□ 1.15
LINC00189-203ENST00000447125 HOXD11P31277 338 aaPredicted RBP21.75■■□□□ 1.07
LINC00189-203ENST00000447125 CNKSR2Q8WXI2 1034 aa21.75■■□□□ 1.07
LINC00189-203ENST00000447125 DCAF8L1A6NGE4 600 aa21.74■■□□□ 1.07
LINC00189-203ENST00000447125 RNF216Q9NWF9 866 aaPredicted RBP21.55■■□□□ 1.04
LINC00189-203ENST00000447125 CACNB1Q02641 598 aaPredicted RBP21.41■■□□□ 1.02
LINC00189-203ENST00000447125 NCBP3Q53F19 620 aaKnown RBP21.24■□□□□ 0.99
LINC00189-203ENST00000447125 RNF39Q9H2S5 420 aa21.24■□□□□ 0.99
LINC00189-203ENST00000447125 NPM3O75607 178 aaKnown RBP21.05■□□□□ 0.96
LINC00189-203ENST00000447125 DNAJC5BQ9UF47 199 aa20.89■□□□□ 0.93
LINC00189-203ENST00000447125 C1QBPQ07021 282 aaKnown RBP20.87■□□□□ 0.93
LINC00189-203ENST00000447125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.73■□□□□ 0.91
LINC00189-203ENST00000447125 KCNA4P22459 653 aa20.65■□□□□ 0.9
LINC00189-203ENST00000447125 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
LINC00189-203ENST00000447125 SLC4A2P04920 1241 aa20.15■□□□□ 0.82
LINC00189-203ENST00000447125 SPINK5Q9NQ38 1064 aaPredicted RBP20.1■□□□□ 0.81
LINC00189-203ENST00000447125 CAPN15O75808 1086 aa20.01■□□□□ 0.79
LINC00189-203ENST00000447125 DSG3P32926 999 aa19.9■□□□□ 0.78
LINC00189-203ENST00000447125 TRHP20396 242 aaPredicted RBP19.71■□□□□ 0.75
LINC00189-203ENST00000447125 ABCB7O75027 752 aa19.6■□□□□ 0.73
LINC00189-203ENST00000447125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.72
LINC00189-203ENST00000447125 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.72
LINC00189-203ENST00000447125 APLP2Q06481 763 aa19.57■□□□□ 0.72
LINC00189-203ENST00000447125 ZNF219Q9P2Y4 722 aaPredicted RBP19.55■□□□□ 0.72
LINC00189-203ENST00000447125 SAMD1Q6SPF0 538 aaPredicted RBP19.51■□□□□ 0.71
LINC00189-203ENST00000447125 SLC4A1APQ9BWU0 796 aaKnown RBP19.42■□□□□ 0.7
LINC00189-203ENST00000447125 MYCNP04198 464 aaPredicted RBP19.4■□□□□ 0.7
LINC00189-203ENST00000447125 FOXD4L1Q9NU39 408 aa19.19■□□□□ 0.66
LINC00189-203ENST00000447125 POLA2Q14181 598 aa19.15■□□□□ 0.66
LINC00189-203ENST00000447125 ATF5Q9Y2D1 282 aaPredicted RBP19.11■□□□□ 0.65
LINC00189-203ENST00000447125 POTEHQ6S545 545 aa19.1■□□□□ 0.65
LINC00189-203ENST00000447125 ZBTB22O15209 634 aa19.01■□□□□ 0.63
LINC00189-203ENST00000447125 RBM42Q9BTD8 480 aaKnown RBP18.87■□□□□ 0.61
LINC00189-203ENST00000447125 ZBTB12Q9Y330 459 aaPredicted RBP18.6■□□□□ 0.57
LINC00189-203ENST00000447125 CHRDL2Q6WN34 429 aa18.56■□□□□ 0.56
LINC00189-203ENST00000447125 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
LINC00189-203ENST00000447125 ATXN8OSP0DMR3 200 aa18.54■□□□□ 0.56
LINC00189-203ENST00000447125 AKT1S1Q96B36 256 aa18.48■□□□□ 0.55
LINC00189-203ENST00000447125 REM2Q8IYK8 340 aaPredicted RBP18.37■□□□□ 0.53
LINC00189-203ENST00000447125 FBLN2P98095 1184 aa18.2■□□□□ 0.5
LINC00189-203ENST00000447125 PITPNM1O00562 1244 aa18.18■□□□□ 0.5
LINC00189-203ENST00000447125 MKRN4PQ13434 485 aaPredicted RBP18.18■□□□□ 0.5
LINC00189-203ENST00000447125 PIP4P2Q8N4L2 257 aa18.15■□□□□ 0.5
LINC00189-203ENST00000447125 SPDYE2BA6NHP3 402 aa18.09■□□□□ 0.49
LINC00189-203ENST00000447125 SPDYE6P0CI01 402 aa18.09■□□□□ 0.49
LINC00189-203ENST00000447125 SPDYE2Q495Y8 402 aa18.09■□□□□ 0.49
LINC00189-203ENST00000447125 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.48
LINC00189-203ENST00000447125 FXR2P51116 673 aaKnown RBP eCLIP18.01■□□□□ 0.47
LINC00189-203ENST00000447125 ZNF692Q9BU19 519 aaPredicted RBP17.93■□□□□ 0.46
LINC00189-203ENST00000447125 SSUH2Q9Y2M2 353 aa17.88■□□□□ 0.45
LINC00189-203ENST00000447125 SP7Q8TDD2 431 aaPredicted RBP17.87■□□□□ 0.45
LINC00189-203ENST00000447125 CLEC11AQ9Y240 323 aa17.86■□□□□ 0.45
LINC00189-203ENST00000447125 HAX1O00165 279 aa17.83■□□□□ 0.44
LINC00189-203ENST00000447125 EHMT2Q96KQ7 1210 aa17.83■□□□□ 0.44
LINC00189-203ENST00000447125 SPDYE1Q8NFV5 336 aaPredicted RBP17.79■□□□□ 0.44
LINC00189-203ENST00000447125 PRKAR2AP13861 404 aaKnown RBP17.71■□□□□ 0.43
LINC00189-203ENST00000447125 EVX2Q03828 476 aa17.71■□□□□ 0.43
LINC00189-203ENST00000447125 PABPN1Q86U42 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
LINC00189-203ENST00000447125 CHADLQ6NUI6 762 aa17.57■□□□□ 0.4
LINC00189-203ENST00000447125 PRR29P0C7W0 189 aa17.51■□□□□ 0.39
LINC00189-203ENST00000447125 C19orf67A6NJJ6 358 aa17.43■□□□□ 0.38
LINC00189-203ENST00000447125 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
LINC00189-203ENST00000447125 GABBR2O75899 941 aa17.22■□□□□ 0.35
LINC00189-203ENST00000447125 FARP1Q9Y4F1 1045 aaPredicted RBP17.22■□□□□ 0.35
LINC00189-203ENST00000447125 CD44P16070 742 aaKnown RBP17.13■□□□□ 0.33
LINC00189-203ENST00000447125 CREBZFQ9NS37 354 aa17.11■□□□□ 0.33
LINC00189-203ENST00000447125 STAG3Q9UJ98 1225 aa17.08■□□□□ 0.32
LINC00189-203ENST00000447125 POTEIP0CG38 1075 aa16.91■□□□□ 0.3
LINC00189-203ENST00000447125 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
LINC00189-203ENST00000447125 ZNF579Q8NAF0 562 aaKnown RBP16.82■□□□□ 0.28
LINC00189-203ENST00000447125 MNX1P50219 401 aaPredicted RBP16.81■□□□□ 0.28
LINC00189-203ENST00000447125 LHX8Q68G74 356 aa16.79■□□□□ 0.28
LINC00189-203ENST00000447125 PROM2Q8N271 834 aa16.79■□□□□ 0.28
LINC00189-203ENST00000447125 CLCN6P51797 869 aa16.75■□□□□ 0.27
LINC00189-203ENST00000447125 GALR2O43603 387 aaPredicted RBP16.72■□□□□ 0.27
LINC00189-203ENST00000447125 PHF12Q96QT6 1004 aa16.7■□□□□ 0.26
LINC00189-203ENST00000447125 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
LINC00189-203ENST00000447125 DCBLD2Q96PD2 775 aa16.69■□□□□ 0.26
LINC00189-203ENST00000447125 PAK3O75914 559 aaPredicted RBP16.65■□□□□ 0.26
LINC00189-203ENST00000447125 TSPYL2Q9H2G4 693 aaPredicted RBP16.51■□□□□ 0.23
LINC00189-203ENST00000447125 MIER1Q8N108 512 aa16.47■□□□□ 0.23
LINC00189-203ENST00000447125 MS4A3Q96HJ5 214 aa16.46■□□□□ 0.23
LINC00189-203ENST00000447125 PELP1Q8IZL8 1130 aaKnown RBP16.43■□□□□ 0.22
LINC00189-203ENST00000447125 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
LINC00189-203ENST00000447125 FKBP8Q14318 412 aa16.38■□□□□ 0.21
LINC00189-203ENST00000447125 POTEB2H3BUK9 544 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms