Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 AC026954.1-201ENST00000429771 1293 ntBASIC12.58□□□□□ -0.4
RNF7Q9UBF6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RNF7Q9UBF6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 RN7SKP175-201ENST00000408472 289 ntBASIC12.57□□□□□ -0.4
RNF7Q9UBF6 AC004945.1-201ENST00000416738 983 ntBASIC12.57□□□□□ -0.4
RNF7Q9UBF6 HLA-V-201ENST00000429037 534 ntBASIC12.57□□□□□ -0.4
RNF7Q9UBF6 YBX1P6-201ENST00000442962 1002 ntBASIC12.57□□□□□ -0.4
RNF7Q9UBF6 CSF2RBP1-201ENST00000447905 391 ntBASIC12.57□□□□□ -0.4
RNF7Q9UBF6 HOMER2P2-201ENST00000451621 847 ntBASIC12.57□□□□□ -0.4
RNF7Q9UBF6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 ZACNP1-201ENST00000612259 710 ntBASIC12.57□□□□□ -0.4
RNF7Q9UBF6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 AC020910.5-201ENST00000623668 1865 ntBASIC12.57□□□□□ -0.4
RNF7Q9UBF6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 AC023824.1-201ENST00000562945 2975 ntBASIC12.57□□□□□ -0.4
RNF7Q9UBF6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF7Q9UBF6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RNF7Q9UBF6 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF7Q9UBF6 AL136172.1-201ENST00000598590 1394 ntBASIC12.56□□□□□ -0.4
RNF7Q9UBF6 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
RNF7Q9UBF6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF7Q9UBF6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RNF7Q9UBF6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.56□□□□□ -0.4
RNF7Q9UBF6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF7Q9UBF6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.56□□□□□ -0.4
RNF7Q9UBF6 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RNF7Q9UBF6 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.56□□□□□ -0.4
RNF7Q9UBF6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF7Q9UBF6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF7Q9UBF6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms