Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 AC140878.1-201ENST00000565277 250 ntBASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.49□□□□□ -0.09
KLHL4Q9C0H6 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 AC073548.1-201ENST00000624088 1882 ntBASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 AL512638.1-201ENST00000457493 794 ntBASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 AC069120.2-201ENST00000524091 540 ntBASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 AL390955.2-201ENST00000603032 514 ntBASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 AL390754.1-201ENST00000619088 582 ntBASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 AC020658.7-201ENST00000624274 2442 ntBASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KLHL4Q9C0H6 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms