Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 SRD5A3P1-201ENST00000603021 949 ntBASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 AC008738.7-201ENST00000609744 511 ntBASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 AC004790.1-201ENST00000612686 536 ntBASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 AC004840.1-201ENST00000636359 365 ntBASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 AC241585.1-201ENST00000433527 519 ntBASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 FAM86GP-201ENST00000448322 971 ntBASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 AC135586.1-201ENST00000539323 574 ntBASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 AC036164.1-201ENST00000570544 333 ntBASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 AC015911.4-201ENST00000588022 1070 ntBASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HDHD3Q9BSH5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms