Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 UNC93B7-201ENST00000509439 705 ntBASIC14.1□□□□□ -0.15
NR1H4Q96RI1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 LILRP1-201ENST00000444199 1370 ntBASIC14.09□□□□□ -0.15
NR1H4Q96RI1 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 AC135782.3-201ENST00000562782 2105 ntBASIC14.09□□□□□ -0.15
NR1H4Q96RI1 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.09□□□□□ -0.15
NR1H4Q96RI1 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 AC011498.7-201ENST00000624986 2027 ntBASIC14.09□□□□□ -0.15
NR1H4Q96RI1 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 AC104457.1-201ENST00000401024 814 ntBASIC14.09□□□□□ -0.15
NR1H4Q96RI1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 RPS8P6-201ENST00000426177 609 ntBASIC14.09□□□□□ -0.15
NR1H4Q96RI1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 EEF1DP4-201ENST00000446006 880 ntBASIC14.09□□□□□ -0.15
NR1H4Q96RI1 FAM197Y8-203ENST00000450145 560 ntBASIC14.09□□□□□ -0.15
NR1H4Q96RI1 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.09□□□□□ -0.15
NR1H4Q96RI1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 Z98257.2-202ENST00000641138 1548 ntBASIC14.09□□□□□ -0.15
NR1H4Q96RI1 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 AGAP10P-201ENST00000454844 2418 ntBASIC14.09□□□□□ -0.15
NR1H4Q96RI1 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.09□□□□□ -0.15
NR1H4Q96RI1 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NR1H4Q96RI1 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.08□□□□□ -0.15
NR1H4Q96RI1 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
NR1H4Q96RI1 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.08□□□□□ -0.15
NR1H4Q96RI1 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NR1H4Q96RI1 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.08□□□□□ -0.15
NR1H4Q96RI1 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
NR1H4Q96RI1 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NR1H4Q96RI1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.08□□□□□ -0.15
NR1H4Q96RI1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.08□□□□□ -0.15
NR1H4Q96RI1 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms