Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 KRT8P35-201ENST00000483942 1338 ntBASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 MIR943-201ENST00000401286 94 ntBASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 AC023310.3-201ENST00000557027 670 ntBASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 AC100756.1-201ENST00000562736 682 ntBASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 AC138749.3-201ENST00000567691 622 ntBASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 AC116165.1-201ENST00000611806 668 ntBASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 AC093028.1-201ENST00000622998 982 ntBASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 AC015818.8-201ENST00000587907 1519 ntBASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 AC011498.7-201ENST00000624986 2027 ntBASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 EIF3FP3-201ENST00000434851 1086 ntBASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 HMGN1P19-201ENST00000436976 333 ntBASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 AC114812.1-204ENST00000449669 728 ntBASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 IGHV3-42-201ENST00000520410 361 ntBASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 AC131206.1-201ENST00000538078 1211 ntBASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 AC104794.3-201ENST00000566840 1248 ntBASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 AC120045.2-201ENST00000567334 178 ntBASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 AC138761.1-201ENST00000584393 385 ntBASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 AC023794.5-201ENST00000564380 2157 ntBASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms