Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 SLED1-202ENST00000512051 380 ntBASIC11.18□□□□□ -0.62
NUP35Q8NFH5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 SAMD11P1-201ENST00000571429 661 ntBASIC11.18□□□□□ -0.62
NUP35Q8NFH5 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 UPK3BP1-201ENST00000428678 509 ntBASIC11.17□□□□□ -0.62
NUP35Q8NFH5 HIST3H2BA-201ENST00000436555 524 ntBASIC11.17□□□□□ -0.62
NUP35Q8NFH5 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 AC009947.1-201ENST00000444350 727 ntBASIC11.17□□□□□ -0.62
NUP35Q8NFH5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 KRT19P2-202ENST00000557173 1012 ntBASIC11.17□□□□□ -0.62
NUP35Q8NFH5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
NUP35Q8NFH5 AC068137.2-201ENST00000605408 478 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms