Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RAPH1Q70E73 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.07■□□□□ 0
RAPH1Q70E73 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RAPH1Q70E73 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAPH1Q70E73 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.07■□□□□ 0
RAPH1Q70E73 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAPH1Q70E73 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.07■□□□□ 0
RAPH1Q70E73 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAPH1Q70E73 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.07■□□□□ 0
RAPH1Q70E73 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RAPH1Q70E73 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.07■□□□□ 0
RAPH1Q70E73 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.07■□□□□ 0
RAPH1Q70E73 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
RAPH1Q70E73 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAPH1Q70E73 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAPH1Q70E73 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAPH1Q70E73 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.07■□□□□ 0
RAPH1Q70E73 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.06■□□□□ 0
RAPH1Q70E73 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.06■□□□□ 0
RAPH1Q70E73 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.06■□□□□ 0
RAPH1Q70E73 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.06■□□□□ 0
RAPH1Q70E73 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.06■□□□□ 0
RAPH1Q70E73 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.06■□□□□ 0
RAPH1Q70E73 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.06■□□□□ 0
RAPH1Q70E73 TSSK5P-201ENST00000423978 907 ntBASIC15.06■□□□□ 0
RAPH1Q70E73 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.06■□□□□ 0
RAPH1Q70E73 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.06■□□□□ 0
RAPH1Q70E73 FAM86LP-201ENST00000478302 853 ntBASIC15.06■□□□□ 0
RAPH1Q70E73 GAPDHP40-201ENST00000505218 1006 ntBASIC15.06■□□□□ 0
RAPH1Q70E73 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.06■□□□□ 0
RAPH1Q70E73 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.06■□□□□ 0
RAPH1Q70E73 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.06■□□□□ 0
RAPH1Q70E73 AC009407.1-201ENST00000568958 598 ntBASIC15.06■□□□□ 0
RAPH1Q70E73 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RAPH1Q70E73 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.06■□□□□ 0
RAPH1Q70E73 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.06■□□□□ 0
RAPH1Q70E73 AC107373.2-201ENST00000607735 490 ntBASIC15.06■□□□□ 0
RAPH1Q70E73 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.06■□□□□ 0
RAPH1Q70E73 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
RAPH1Q70E73 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.06■□□□□ 0
RAPH1Q70E73 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.06■□□□□ 0
RAPH1Q70E73 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 AL138799.1-201ENST00000448213 1675 ntBASIC15.06■□□□□ 0
RAPH1Q70E73 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.06■□□□□ 0
RAPH1Q70E73 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RAPH1Q70E73 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.06■□□□□ 0
RAPH1Q70E73 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RAPH1Q70E73 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RAPH1Q70E73 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
RAPH1Q70E73 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
RAPH1Q70E73 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAPH1Q70E73 CICP8-201ENST00000455800 2813 ntBASIC15.05■□□□□ 0
RAPH1Q70E73 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAPH1Q70E73 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAPH1Q70E73 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAPH1Q70E73 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
RAPH1Q70E73 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAPH1Q70E73 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAPH1Q70E73 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAPH1Q70E73 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAPH1Q70E73 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAPH1Q70E73 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAPH1Q70E73 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.05■□□□□ -0
RAPH1Q70E73 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.05■□□□□ -0
RAPH1Q70E73 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.05■□□□□ -0
RAPH1Q70E73 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.05■□□□□ -0
RAPH1Q70E73 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.05■□□□□ -0
RAPH1Q70E73 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.05■□□□□ -0
RAPH1Q70E73 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.05■□□□□ -0
RAPH1Q70E73 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.05■□□□□ -0
RAPH1Q70E73 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.05■□□□□ -0
RAPH1Q70E73 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
RAPH1Q70E73 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.05■□□□□ -0
RAPH1Q70E73 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.05■□□□□ -0
RAPH1Q70E73 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.05■□□□□ -0
RAPH1Q70E73 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.05■□□□□ -0
RAPH1Q70E73 AC093525.8-201ENST00000624099 1342 ntBASIC15.05■□□□□ -0
RAPH1Q70E73 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAPH1Q70E73 DRD5P1-201ENST00000456605 1438 ntBASIC15.05■□□□□ -0
RAPH1Q70E73 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms