Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
HIST1H1AQ02539 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
HIST1H1AQ02539 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.52□□□□□ -0.56
HIST1H1AQ02539 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
HIST1H1AQ02539 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.52□□□□□ -0.56
HIST1H1AQ02539 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.52□□□□□ -0.56
HIST1H1AQ02539 AC138969.3-201ENST00000546612 1459 ntBASIC11.52□□□□□ -0.56
HIST1H1AQ02539 AC138932.2-201ENST00000548268 1459 ntBASIC11.52□□□□□ -0.56
HIST1H1AQ02539 AC126755.4-201ENST00000549796 1459 ntBASIC11.52□□□□□ -0.56
HIST1H1AQ02539 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
HIST1H1AQ02539 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.52□□□□□ -0.56
HIST1H1AQ02539 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
HIST1H1AQ02539 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 MIR943-201ENST00000401286 94 ntBASIC11.52□□□□□ -0.57
HIST1H1AQ02539 TOMM22P5-201ENST00000416399 439 ntBASIC11.52□□□□□ -0.57
HIST1H1AQ02539 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 AC004461.2-201ENST00000629517 803 ntBASIC11.52□□□□□ -0.57
HIST1H1AQ02539 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
HIST1H1AQ02539 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.51□□□□□ -0.57
HIST1H1AQ02539 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 AP001160.2-201ENST00000596071 487 ntBASIC11.51□□□□□ -0.57
HIST1H1AQ02539 AL158211.3-201ENST00000607385 239 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms