Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
RAB4AP20338 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
RAB4AP20338 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.52□□□□□ -0.57
RAB4AP20338 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.52□□□□□ -0.57
RAB4AP20338 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RAB4AP20338 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RAB4AP20338 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.51□□□□□ -0.57
RAB4AP20338 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
RAB4AP20338 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.51□□□□□ -0.57
RAB4AP20338 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.51□□□□□ -0.57
RAB4AP20338 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RAB4AP20338 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
RAB4AP20338 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
RAB4AP20338 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RAB4AP20338 AC068760.1-201ENST00000493579 1953 ntBASIC11.51□□□□□ -0.57
RAB4AP20338 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
RAB4AP20338 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.51□□□□□ -0.57
RAB4AP20338 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.51□□□□□ -0.57
RAB4AP20338 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
RAB4AP20338 LAGE3P1-201ENST00000425356 484 ntBASIC11.51□□□□□ -0.57
RAB4AP20338 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 KRT18P34-201ENST00000488218 1270 ntBASIC11.51□□□□□ -0.57
RAB4AP20338 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.51□□□□□ -0.57
RAB4AP20338 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.51□□□□□ -0.57
RAB4AP20338 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RAB4AP20338 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.51□□□□□ -0.57
RAB4AP20338 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RAB4AP20338 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RAB4AP20338 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC11.51□□□□□ -0.57
RAB4AP20338 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RAB4AP20338 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.51□□□□□ -0.57
RAB4AP20338 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
RAB4AP20338 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
RAB4AP20338 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC11.51□□□□□ -0.57
RAB4AP20338 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB4AP20338 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.51□□□□□ -0.57
RAB4AP20338 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.5□□□□□ -0.57
RAB4AP20338 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
RAB4AP20338 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 MIR497HG-202ENST00000572453 3838 ntBASIC11.5□□□□□ -0.57
RAB4AP20338 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
RAB4AP20338 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.5□□□□□ -0.57
RAB4AP20338 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.5□□□□□ -0.57
RAB4AP20338 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 PCDHB18P-202ENST00000526308 3197 ntBASIC11.5□□□□□ -0.57
RAB4AP20338 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
RAB4AP20338 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.5□□□□□ -0.57
RAB4AP20338 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 PCED1CP-201ENST00000419887 785 ntBASIC11.5□□□□□ -0.57
RAB4AP20338 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.5□□□□□ -0.57
RAB4AP20338 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 FGFR3P6-201ENST00000457012 610 ntBASIC11.5□□□□□ -0.57
RAB4AP20338 SCARNA2-201ENST00000458748 420 ntBASIC11.5□□□□□ -0.57
RAB4AP20338 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
RAB4AP20338 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.5□□□□□ -0.57
RAB4AP20338 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.5□□□□□ -0.57
RAB4AP20338 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.5□□□□□ -0.57
RAB4AP20338 AL732292.2-201ENST00000609649 430 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms