Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SFTPBP07988 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SFTPBP07988 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.07□□□□□ -0.32
SFTPBP07988 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
SFTPBP07988 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.07□□□□□ -0.32
SFTPBP07988 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.07□□□□□ -0.32
SFTPBP07988 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.07□□□□□ -0.32
SFTPBP07988 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.07□□□□□ -0.32
SFTPBP07988 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.07□□□□□ -0.32
SFTPBP07988 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SFTPBP07988 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.07□□□□□ -0.32
SFTPBP07988 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.07□□□□□ -0.32
SFTPBP07988 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.07□□□□□ -0.32
SFTPBP07988 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.07□□□□□ -0.32
SFTPBP07988 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SFTPBP07988 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.07□□□□□ -0.32
SFTPBP07988 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SFTPBP07988 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
SFTPBP07988 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.06□□□□□ -0.32
SFTPBP07988 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.06□□□□□ -0.32
SFTPBP07988 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.06□□□□□ -0.32
SFTPBP07988 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SFTPBP07988 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
SFTPBP07988 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.06□□□□□ -0.32
SFTPBP07988 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
SFTPBP07988 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
SFTPBP07988 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SFTPBP07988 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SFTPBP07988 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.06□□□□□ -0.32
SFTPBP07988 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.06□□□□□ -0.32
SFTPBP07988 AL589987.1-201ENST00000453380 819 ntBASIC13.06□□□□□ -0.32
SFTPBP07988 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.06□□□□□ -0.32
SFTPBP07988 AP005018.1-201ENST00000525475 301 ntBASIC13.06□□□□□ -0.32
SFTPBP07988 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.06□□□□□ -0.32
SFTPBP07988 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.06□□□□□ -0.32
SFTPBP07988 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.06□□□□□ -0.32
SFTPBP07988 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.06□□□□□ -0.32
SFTPBP07988 SPDYE22P-201ENST00000582158 798 ntBASIC13.06□□□□□ -0.32
SFTPBP07988 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.06□□□□□ -0.32
SFTPBP07988 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
SFTPBP07988 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.06□□□□□ -0.32
SFTPBP07988 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SFTPBP07988 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.06□□□□□ -0.32
SFTPBP07988 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SFTPBP07988 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.06□□□□□ -0.32
SFTPBP07988 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SFTPBP07988 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SFTPBP07988 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SFTPBP07988 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SFTPBP07988 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SFTPBP07988 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SFTPBP07988 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.05□□□□□ -0.32
SFTPBP07988 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SFTPBP07988 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.05□□□□□ -0.32
SFTPBP07988 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SFTPBP07988 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SFTPBP07988 AC018529.2-202ENST00000611482 3087 ntBASIC13.05□□□□□ -0.32
SFTPBP07988 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SFTPBP07988 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SFTPBP07988 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SFTPBP07988 MTHFR-210ENST00000641407 2387 ntBASIC13.05□□□□□ -0.32
SFTPBP07988 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.05□□□□□ -0.32
SFTPBP07988 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SFTPBP07988 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SFTPBP07988 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.05□□□□□ -0.32
SFTPBP07988 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.05□□□□□ -0.32
SFTPBP07988 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
SFTPBP07988 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms