Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TIMP1P01033 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TIMP1P01033 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.78■□□□□ 0.12
TIMP1P01033 MIR566-201ENST00000385187 94 ntBASIC15.78■□□□□ 0.12
TIMP1P01033 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TIMP1P01033 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC15.78■□□□□ 0.12
TIMP1P01033 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.78■□□□□ 0.12
TIMP1P01033 SCARNA12-201ENST00000459155 270 ntBASIC15.78■□□□□ 0.12
TIMP1P01033 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC15.78■□□□□ 0.12
TIMP1P01033 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TIMP1P01033 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.78■□□□□ 0.12
TIMP1P01033 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC15.78■□□□□ 0.12
TIMP1P01033 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC15.78■□□□□ 0.12
TIMP1P01033 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC15.78■□□□□ 0.12
TIMP1P01033 AC010632.2-201ENST00000588369 1224 ntBASIC15.78■□□□□ 0.12
TIMP1P01033 AL139339.2-201ENST00000608063 657 ntBASIC15.78■□□□□ 0.12
TIMP1P01033 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 ZNF436-AS1-201ENST00000335648 2547 ntBASIC15.78■□□□□ 0.12
TIMP1P01033 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TIMP1P01033 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
TIMP1P01033 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.78■□□□□ 0.12
TIMP1P01033 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.78■□□□□ 0.12
TIMP1P01033 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TIMP1P01033 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.78■□□□□ 0.12
TIMP1P01033 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TIMP1P01033 BRD7P5-201ENST00000299197 1822 ntBASIC15.78■□□□□ 0.12
TIMP1P01033 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
TIMP1P01033 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
TIMP1P01033 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.77■□□□□ 0.12
TIMP1P01033 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.77■□□□□ 0.12
TIMP1P01033 AC108734.2-201ENST00000420887 1069 ntBASIC15.77■□□□□ 0.12
TIMP1P01033 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC15.77■□□□□ 0.12
TIMP1P01033 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC15.77■□□□□ 0.12
TIMP1P01033 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TIMP1P01033 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC15.77■□□□□ 0.12
TIMP1P01033 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TIMP1P01033 RN7SL582P-201ENST00000491078 279 ntBASIC15.77■□□□□ 0.12
TIMP1P01033 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.77■□□□□ 0.12
TIMP1P01033 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.77■□□□□ 0.12
TIMP1P01033 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.77■□□□□ 0.12
TIMP1P01033 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.77■□□□□ 0.12
TIMP1P01033 AC010976.2-201ENST00000609697 852 ntBASIC15.77■□□□□ 0.12
TIMP1P01033 AC006483.2-201ENST00000609813 515 ntBASIC15.77■□□□□ 0.12
TIMP1P01033 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TIMP1P01033 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.77■□□□□ 0.11
TIMP1P01033 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
TIMP1P01033 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TIMP1P01033 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TIMP1P01033 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TIMP1P01033 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TIMP1P01033 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.77■□□□□ 0.11
TIMP1P01033 AC023024.2-201ENST00000623561 1993 ntBASIC15.76■□□□□ 0.11
TIMP1P01033 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.76■□□□□ 0.11
TIMP1P01033 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TIMP1P01033 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
TIMP1P01033 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.76■□□□□ 0.11
TIMP1P01033 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.76■□□□□ 0.11
TIMP1P01033 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.76■□□□□ 0.11
TIMP1P01033 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC15.76■□□□□ 0.11
TIMP1P01033 AC063952.3-201ENST00000467756 308 ntBASIC15.76■□□□□ 0.11
TIMP1P01033 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.76■□□□□ 0.11
TIMP1P01033 TREHP1-201ENST00000531328 465 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms